MirGeneDB ID | Dlo-Mir-67-P15-v2 |
Family name |
MIR-67 (all species) |
Seed |
CACAGCC |
Species |
Braconid wasp (Diachasmimorpha longicaudata) |
MiRBase ID |
|
Paralogues |
Dlo-Mir-67-P14-v1
Dlo-Mir-67-P14-v2
Dlo-Mir-67-P14-v3
Dlo-Mir-67-P15-v1
|
Orthologues |
Asu-Mir-67
Bge-Mir-67
Cbr-Mir-67
Cel-Mir-67
Cte-Mir-67
Dgr-Mir-67
Dma-Mir-67
Dpu-Mir-67
Egr-Mir-67
Gsa-Mir-67
Hru-Mir-67
Isc-Mir-67
Lan-Mir-67
Lgi-Mir-67
Npo-Mir-67
Obi-Mir-67
Ofu-Mir-67
Ovu-Mir-67
Pau-Mir-67
Pca-Mir-67
Pdu-Mir-67
Sma-Mir-67
Sme-Mir-67
Snu-Mir-67
Tur-Mir-67
|
Node of Origin (locus) |
D. longicaudata
|
Node of Origin (family) |
Protostomia
|
Genome context (GCF_034640455.1_iyDiaLong2_genomic) |
NC_087235.1: 3201488-3201549 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUCAGAACAUCGACAUAUCGACUGCUUUGCCCGUCAGAGUGGUUGUGAUGUGGGGAUUUUGUGAAUGCAUAUCACAGCCAGCUUUGAUGAGCGAUACAGUACGAUCAAUCUCAUCUGCAGUC
Get precursor sequence
|
Structure | 10 20 30 40 50
UUCAGAACAUCGACAUA- - CU C -| UGGGGAUUU
UCG ACUG UUGC CGUCAGAG UGGUUGUGAUG \
AGC UGAC AGCG GUAGUUUC ACCGACACUAU U
CUGACGUCUACUCUAACU A AU A G^ ACGUAAGUG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Dlo-Mir-67-P15-v2_5p* |
mirBase accession | None |
Sequence |
0- CCGUCAGAGUGGUUGUGAUG -20
Get sequence
|
Mature sequence |
Dlo-Mir-67-P15-v2_3p |
mirBase accession | None |
Sequence |
41- UCACAGCCAGCUUUGAUGAGC -62
Get sequence
|