MirGeneDB ID | Pcr-Mir-67-v1 |
Family name |
MIR-67 (all species) |
Seed |
CACAACC |
Species |
Tiger flatworm (Prostheceraeus crozieri ) |
MiRBase ID |
|
Paralogues |
Pcr-Mir-67-v2
|
Orthologues |
Aae-Mir-67-v1
Aga-Mir-67-v1
Agr-Mir-67-v1
Asu-Mir-67
Bge-Mir-67
Cbr-Mir-67
Cel-Mir-67
Cte-Mir-67
Dan-Mir-67-v1
Dgr-Mir-67
Dma-Mir-67
Dme-Mir-67-v1
Dmo-Mir-67-v1
Dpu-Mir-67
Dsi-Mir-67-v1
Dya-Mir-67-v1
Eba-Mir-67-v1
Egr-Mir-67
Gsa-Mir-67
Hme-Mir-67-v1
Hru-Mir-67
Isc-Mir-67
Lan-Mir-67
Lgi-Mir-67
Mom-Mir-67-v1
Npo-Mir-67
Obi-Mir-67
Ofu-Mir-67
Ovu-Mir-67
Pau-Mir-67
Pca-Mir-67
Pdu-Mir-67
Pve-Mir-67-v1
Rph-Mir-67-v1
Sma-Mir-67
Sme-Mir-67
Snu-Mir-67
Tca-Mir-67-v1
Tur-Mir-67
War-Mir-67-v1
|
Node of Origin (locus) |
Protostomia
|
Node of Origin (family) |
Protostomia
|
Genome context (GCA_907163375.1_PROCRO_GENOME_genomic) |
CAJQUW010001420.1: 936566-936627 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AGAAAGUCCUCAUUCCCUGCGAAGUCACAACCUCAUUCGAUACGGUUGCGAUGAGGAAAGAUGAAUACAUCACAACCUAUUUGAAUGAGGGGAAGCCUUCGACUGAUCAUCGCAGUUCAUCG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AGAAAGUCCUCAUUCCCUG--| UCACAA UAC C AGGAAA
CGAAG CCUCAUUCGA GGUUG GAUG G
GCUUC GGAGUAAGUU CCAAC CUAC A
GCUACUUGACGCUACUAGUCA^ CGAAGG UAU A AUAAGU
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Pcr-Mir-67-v1_5p* |
mirBase accession | None |
Sequence |
0- CCUCAUUCGAUACGGUUGCGAUG -23
Get sequence
|
Mature sequence |
Pcr-Mir-67-v1_3p |
mirBase accession | None |
Sequence |
39- UCACAACCUAUUUGAAUGAGGGG -62
Get sequence
|