MirGeneDB 3.0

MirGeneDB ID

Aga-Mir-67-v1

Family name MIR-67 (all species)
Seed CACAACC
Species African malaria mosquito (Anopheles gambiae)
MiRBase ID aga-mir-307
Paralogues Aga-Mir-67-v2 
Orthologues Aae-Mir-67-v1  Agr-Mir-67-v1  Asu-Mir-67  Bge-Mir-67  Cbr-Mir-67  Cel-Mir-67  Cte-Mir-67  Dan-Mir-67-v1  Dgr-Mir-67  Dma-Mir-67  Dme-Mir-67-v1  Dmo-Mir-67-v1  Dpu-Mir-67  Dsi-Mir-67-v1  Dya-Mir-67-v1  Eba-Mir-67-v1  Egr-Mir-67  Gsa-Mir-67  Hme-Mir-67-v1  Hru-Mir-67  Isc-Mir-67  Lan-Mir-67  Lgi-Mir-67  Mom-Mir-67-v1  Npo-Mir-67  Obi-Mir-67  Ofu-Mir-67  Ovu-Mir-67  Pau-Mir-67  Pca-Mir-67  Pcr-Mir-67-v1  Pdu-Mir-67  Pve-Mir-67-v1  Rph-Mir-67-v1  Sma-Mir-67  Sme-Mir-67  Snu-Mir-67  Tca-Mir-67-v1  Tur-Mir-67  War-Mir-67-v1 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)
NC_064602.1: 91904833-91904891 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-67-v1)
Mir-67-v1 NC_064602.1: 91904833-91904891 [+] Ensembl
Mir-67-v2 NC_064602.1: 91904833-91904891 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
CUCUCUCUCUCUGGACUCAUUCUCUCGAUCACUCACUCAACCUGGGUGUGAUGCUUUUUUGAAUCAUCACAACCUCCUUGAGUGAGCGACCGCGGAUUGACUAAAACCACACAUACGCA
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Structure
        10           20        30        40        50         
CUCUCUCUCUCUGGACU---| U  U U  A  A         CCU  G       CUUUU 
                    CA UC C CG UC CUCACUCAA   GG UGUGAUG     \
                    GU AG G GC AG GAGUGAGUU   CC ACACUAC     U
ACGCAUACACACCAAAAUCA^ U  - C  C  C         CCU  A       UAAGU 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Ab Ab He He Mi Mi Ov Ov Ov
Star sequence

Aga-Mir-67-v1_5p* (predicted)

mirBase accessionNone
Sequence
0- ACUCACUCAACCUGGGUGUGAUG -23
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Mature sequence

Aga-Mir-67-v1_3p

mirBase accessionMIMAT0001519
Sequence
36- UCACAACCUCCUUGAGUGAGCGA -59
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