Mir-67-v2

MirGeneDB ID

Aga-Mir-67-v2

Family name

MIR-67 (all species)

Seed

ACAACCU

Species

African malaria mosquito (Anopheles gambiae)

MiRBase ID

aga-mir-307

Paralogues

Aga-Mir-67-v1

Orthologues

Aae-Mir-67-v2 Agr-Mir-67-v2 Asu-Mir-67 Bge-Mir-67 Cbr-Mir-67 Cel-Mir-67 Cte-Mir-67 Dan-Mir-67-v2 Dgr-Mir-67 Dma-Mir-67 Dme-Mir-67-v2 Dmo-Mir-67-v2 Dpu-Mir-67 Dsi-Mir-67-v2 Dya-Mir-67-v2 Eba-Mir-67-v2 Egr-Mir-67 Gsa-Mir-67 Hme-Mir-67-v2 Hru-Mir-67 Isc-Mir-67 Lan-Mir-67 Lgi-Mir-67 Mom-Mir-67-v2 Npo-Mir-67 Obi-Mir-67 Ofu-Mir-67 Ovu-Mir-67 Pau-Mir-67 Pca-Mir-67 Pcr-Mir-67-v2 Pdu-Mir-67 Pve-Mir-67-v2 Rph-Mir-67-v2 Sma-Mir-67 Sme-Mir-67 Snu-Mir-67 Tca-Mir-67-v2 Tur-Mir-67 War-Mir-67-v2

Node of Origin (locus)

Protostomia

Node of Origin (family)

Protostomia

Genome context
(GCF_943734735.2_idAnoGambNW_F1_1_genomic)

NC_064602.1: 91904833-91904891 [+] Ensembl

Clustered miRNAs
(< 50kb from Mir-67-v2)

Mir-67-v1 NC_064602.1: 91904833-91904891 [+] Ensembl
Mir-67-v2 NC_064602.1: 91904833-91904891 [+] Ensembl

Precursor
(pre-Mir +30nt flank)

CUCUCUCUCUCUGGACUCAUUCUCUCGAUCACUCACUCAACCUGGGUGUGAUGCUUUUUUGAAUCAUCACAACCUCCUUGAGUGAGCGACCGCGGAUUGACUAAAACCACACAUACGCA

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Structure

        10           20        30        40        50         
CUCUCUCUCUCUGGACU---| U  U U  A  A         CCU  G      GCUUUU 
                    CA UC C CG UC CUCACUCAA   GG UGUGAU      \
                    GU AG G GC AG GAGUGAGUU   CC ACACUA      U
ACGCAUACACACCAAAAUCA^ U  - C  C  C         CCU  A      CUAAGU 
       110       100         90        80        70        60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Ab	Ab	He	He	Mi	Mi	Ov	Ov	Ov

Star sequence

Aga-Mir-67-v2_5p* (predicted)

mirBase accession

None

Sequence

0- ACUCACUCAACCUGGGUGUGAU -22

Get sequence

Mature sequence

Aga-Mir-67-v2_3p

mirBase accession

MIMAT0001519

Sequence

37- CACAACCUCCUUGAGUGAGCGA -59

Get sequence