MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-67-v3

Family name MIR-67 (all species)
Seed CAACCUC
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-307
Paralogues Tca-Mir-67-v1  Tca-Mir-67-v2 
Orthologues Asu-Mir-67  Bge-Mir-67  Cbr-Mir-67  Cel-Mir-67  Cte-Mir-67  Dgr-Mir-67  Dma-Mir-67  Dme-Mir-67-v3  Dpu-Mir-67  Dsi-Mir-67-v3  Dya-Mir-67-v3  Egr-Mir-67  Gsa-Mir-67  Hru-Mir-67  Isc-Mir-67  Lan-Mir-67  Lgi-Mir-67  Npo-Mir-67  Obi-Mir-67  Ofu-Mir-67  Ovu-Mir-67  Pau-Mir-67  Pca-Mir-67  Pdu-Mir-67  Sma-Mir-67  Sme-Mir-67  Snu-Mir-67  Tur-Mir-67 
Node of Origin (locus) Protostomia
Node of Origin (family) Protostomia
Genome context
(Tcas5.2)		 LG8: 13556470-13556530 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-67-v3)		 Mir-67-v1 LG8: 13556470-13556530 [+] Ensembl
Mir-67-v2 LG8: 13556470-13556530 [+] Ensembl
Mir-67-v3 LG8: 13556470-13556530 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GGUGAAAUGAAGCCACUAUCUAUCUCGGUGACUCACUCAACCUGGGUGUGAUGUGUUUGCUGUACCAUCACAACCUCCUUGAGUGAGCGACCGGGUGGAUAUCACCGACAUUUUUACACCA
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Structure
        10            20        30        40        50         
GGUGAAAUGAAGCCACU----|      U    GA         CCU  G     UGUGUUU 
                     AUCUAUC CGGU  CUCACUCAA   GG UGUGA       G
                     UAGGUGG GCCA  GAGUGAGUU   CC ACACU       C
ACCACAUUUUUACAGCCACUA^      -    GC         CCU  A     ACCAUGU 
 .       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-67-v3_5p*
mirBase accessionMIMAT0019129
Sequence 
0- ACUCACUCAACCUGGGUGUGA -21
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Mature sequence

Tca-Mir-67-v3_3p
mirBase accessionMIMAT0008389
Sequence 
39- ACAACCUCCUUGAGUGAGCGAC -61
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