MirGeneDB 3.0
75 microRNA genes with node of origin C. gigas
Sort by genome coordinates Motifs
MirGeneDB ID ▲ MiRBase ID Family Seed 5p accession 3p accession Chromosome Start End Strand Node of origin (locus) Node of origin (family) 3' NTU  UG  UGUG CNNC
Mgi-Mir-2-o56 None MIR-2 GGUCAAU None None scaffold602 445001 445057 + C. gigas Protostomia No 1
Mgi-Mir-2-o57 None MIR-2 AUCACAG None None scaffold602 445414 445474 + C. gigas Protostomia No 1
Mgi-Mir-2-o58a None MIR-2 AUCACAG None None scaffold1503 15162 15221 - C. gigas Protostomia No 1
Mgi-Mir-2-o58b None MIR-2 AUCACAG None None scaffold602 445724 445782 + C. gigas Protostomia No 1
Mgi-Mir-2-o59 None MIR-2 AUCACAG None None scaffold602 445843 445901 + C. gigas Protostomia No
Mgi-Mir-2-o60 None MIR-2 AUCACAG None None scaffold602 446019 446076 + C. gigas Protostomia No 1
Mgi-Mir-2-o61 None MIR-2 AUCACAG None None scaffold602 446534 446592 + C. gigas Protostomia No 1 1
Mgi-Mir-2-o62 None MIR-2 AUCACAG None None scaffold1503 13873 13931 - C. gigas Protostomia No 1 1
Mgi-Mir-9-P17 None MIR-9 CUUUGGU None None scaffold42448 85409 85470 - C. gigas Bilateria No 1
Mgi-Mir-9-P18 None MIR-9 CUUUGGU None None scaffold42448 84463 84524 - C. gigas Bilateria No 1
Mgi-Mir-9-P19 None MIR-9 CUUUGGU None None scaffold42448 83582 83643 - C. gigas Bilateria No 1
Mgi-Mir-67-P4 None MIR-67 ACAACCU None None scaffold146 102295 102351 + C. gigas Protostomia No 1 1
Mgi-Mir-67-P5 None MIR-67 CACAACC None None scaffold146 102638 102698 + C. gigas Protostomia No 1
Mgi-Mir-67-P6 None MIR-67 CACAACC None None scaffold226 224596 224654 - C. gigas Protostomia No 1 1
Mgi-Mir-92-o32 None MIR-92 AUUGCAC None None C33654 9471 9530 + C. gigas Bilateria No 1 1
Mgi-Mir-92-o33 None MIR-92 AUUGCAC None None scaffold459 320194 320253 - C. gigas Bilateria No 1 1
Mgi-Mir-92-o34 None MIR-92 AUUGCAC None None scaffold459 311201 311262 - C. gigas Bilateria No 1
Mgi-Mir-92-o35 None MIR-92 AUUGCAC None None scaffold459 310883 310941 - C. gigas Bilateria No 1 1
Mgi-Mir-96-P2l None MIR-96 UUGGCAC None None scaffold626 26567 26631 + C. gigas Bilateria No 1
Mgi-Mir-96-P2m None MIR-96 UUGGCAC None None scaffold42648 4758 4816 + C. gigas Bilateria No 1
Mgi-Mir-184-P7 None MIR-184 GGACGGA None None scaffold1832 85298 85356 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P8a None MIR-184 GGACGGA None None scaffold43150 62920 62976 - C. gigas Nephrozoa No
Mgi-Mir-184-P8b None MIR-184 GGACGGA None None scaffold121 721341 721398 - C. gigas Nephrozoa No
Mgi-Mir-184-P8c None MIR-184 GGACGGA None None scaffold121 721728 721785 - C. gigas Nephrozoa No
Mgi-Mir-184-P8d None MIR-184 GGACGGA None None scaffold43150 66305 66362 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P9 None MIR-184 CUUGUCA None None scaffold121 720703 720760 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P10 None MIR-184 GGACGGA None None scaffold43150 66053 66110 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P11 None MIR-184 GGACGGA None None scaffold121 721087 721144 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P12 None MIR-184 CUUGUCA None None scaffold121 718786 718842 - C. gigas Nephrozoa No
Mgi-Mir-184-P13a None MIR-184 CUUGUCA None None scaffold43150 67584 67641 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P13b None MIR-184 GGACGGA None None scaffold43150 66456 66512 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P14 None MIR-184 GGACGGA None None scaffold43150 66584 66641 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15a1 None MIR-184 GGACGGA None None scaffold121 718149 718206 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15a2 None MIR-184 GGACGGA None None scaffold121 719424 719481 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15a3 None MIR-184 GGACGGA None None scaffold121 720319 720376 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15a4 None MIR-184 GGACGGA None None scaffold121 721600 721657 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15a5 None MIR-184 GGACGGA None None scaffold121 721856 721913 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15a6 None MIR-184 GGACGGA None None scaffold121 722115 722172 - C. gigas Nephrozoa No
Mgi-Mir-184-P15a7 None MIR-184 GGACGGA None None scaffold121 722371 722428 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15b None MIR-184 GGACGGA None None scaffold121 721987 722044 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15c None MIR-184 GGACGGA None None scaffold121 718530 718587 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15d None MIR-184 GGACGGA None None scaffold121 718658 718715 - C. gigas Nephrozoa No
Mgi-Mir-184-P15e1 None MIR-184 GGACGGA None None scaffold121 718275 718332 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15e2 None MIR-184 GGACGGA None None scaffold121 718401 718458 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15e3 None MIR-184 GGACGGA None None scaffold121 720447 720504 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15f None MIR-184 GGACGGA None None scaffold121 719552 719609 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15g1 None MIR-184 GGACGGA None None scaffold121 719041 719098 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15g2 None MIR-184 GGACGGA None None scaffold121 719169 719226 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15g3 None MIR-184 GGACGGA None None scaffold121 719297 719354 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15h None MIR-184 GGACGGA None None scaffold121 720192 720249 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15i None MIR-184 GGACGGA None None scaffold121 721214 721271 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15j None MIR-184 GGACGGA None None scaffold121 720064 720121 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15k None MIR-184 GGACGGA None None scaffold121 721469 721526 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15l1 None MIR-184 GGACGGA None None scaffold121 719680 719737 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15l2 None MIR-184 GGACGGA None None scaffold121 720575 720632 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15m None MIR-184 GGACGGA None None scaffold121 718913 718970 - C. gigas Nephrozoa No
Mgi-Mir-184-P15n None MIR-184 GGACGGA None None scaffold43150 63749 63806 - C. gigas Nephrozoa No
Mgi-Mir-184-P15o None MIR-184 GGACGGA None None scaffold43150 64048 64105 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15p None MIR-184 GGACGGA None None scaffold43150 65310 65367 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15q None MIR-184 GGACGGA None None scaffold43150 66926 66983 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15r None MIR-184 GGACGGA None None scaffold43150 67056 67113 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15s None MIR-184 GGACGGA None None scaffold43150 63192 63248 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15t None MIR-184 GGACGGA None None scaffold43150 63471 63527 - C. gigas Nephrozoa No 1
Mgi-Mir-184-P15u None MIR-184 GGACGGA None None scaffold43150 64385 64441 - C. gigas Nephrozoa No 1
Mgi-Mir-317-P1 None MIR-317 GAACACA None None scaffold622 468076 468134 + C. gigas Protostomia No 1
Mgi-Mir-317-P2 None MIR-317 GAACACA None None scaffold622 468583 468640 + C. gigas Protostomia No 1
Mgi-Mir-375-P3 None MIR-375 UUGUUCA None None scaffold527 289953 290015 + C. gigas Nephrozoa No 1 1
Mgi-Mir-375-P4 None MIR-375 UUGUUCA None None scaffold527 290181 290238 + C. gigas Nephrozoa No 1
Mgi-Novel-1 None MGI-NOVEL-1 GGCGAGC None None scaffold960 301290 301359 + C. gigas C. gigas Yes
Mgi-Novel-2 None MGI-NOVEL-2 GAGCUCA None None scaffold1094 247350 247410 + C. gigas C. gigas Yes 1
Mgi-Novel-3 None MGI-NOVEL-3 CAUACAA None None scaffold1742 63371 63430 + C. gigas C. gigas No
Mgi-Novel-4 None MGI-NOVEL-4 GCACCAA None None scaffold370 643284 643343 + C. gigas C. gigas No 1
Mgi-Novel-5 None MGI-NOVEL-5 GCUAUAA None None scaffold631 283594 283651 - C. gigas C. gigas No
Mgi-Novel-6 None MGI-NOVEL-6 GUGGUGC None None scaffold43364 108910 108968 + C. gigas C. gigas No 1 1
Mgi-Novel-7 None MGI-NOVEL-7 GGUUAAG None None scaffold705 16090 16154 + C. gigas C. gigas No

Download sequences for: precursor | 5p | 3p | mature | star | mature/star | loop | extend_pre | all