MirGeneDB 3.0

MirGeneDB ID

Csc-Mir-7-P14

Family name MIR-7 (all species)
Seed GGAAGAC
Species Arizona bark scorpion (Centruroides sculpturatus)
MiRBase ID
Paralogues Csc-Mir-7-P15 
Orthologues Aae-Mir-7  Aga-Mir-7  Agr-Mir-7  Asu-Mir-7  Bfl-Mir-7  Bge-Mir-7  Bla-Mir-7  Cin-Mir-7  Cte-Mir-7  Dan-Mir-7  Dlo-Mir-7  Dma-Mir-7  Dme-Mir-7  Dmo-Mir-7  Dsi-Mir-7  Dya-Mir-7  Eba-Mir-7  Esc-Mir-7  Gpa-Mir-7  Gsa-Mir-7  Gsp-Mir-7  Hme-Mir-7  Hmi-Mir-7  Hru-Mir-7  Isc-Mir-7  Lan-Mir-7  Lgi-Mir-7  Llo-Mir-7  Lpo-Mir-7  Mgi-Mir-7  Mom-Mir-7  Npo-Mir-7  Obi-Mir-7  Ofu-Mir-7  Ovu-Mir-7  Pau-Mir-7  Pca-Mir-7  Pcr-Mir-7  Pdu-Mir-7  Pfl-Mir-7  Pmi-Mir-7  Pve-Mir-7  Rph-Mir-7  Sko-Mir-7  Sne-Mir-7  Snu-Mir-7  Spu-Mir-7  Sro-Mir-7  Tca-Mir-7  War-Mir-7  Xbo-Mir-7 
Node of Origin (locus) C. sculpturatus
Node of Origin (family) Bilateria
Genome context
(GCF_000671375.1_CSC)
NW_019384339.1: 676564-676623 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CUGUUUCCUUAUUAAUUCUUGUUCCCUGUCUGGAAGACUAGUGAUUUUGUUGUUCUGAAUAUGAGAAACAAAGAAUCUCUAUCUUCCGAUAGUGUGCAAGAAAAUCAACAAAUACUUCAA
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Structure
        10           20        30        40        50        60
CUGUUUCCUUAUUAAUU---|    UCC     U      C   U      G     CUGAA 
                    CUUGU   CUGUC GGAAGA UAG GAUUUU UUGUU     U
                    GAACG   GAUAG CCUUCU AUC CUAAGA AACAA     A
AACUUCAUAAACAACUAAAA^    UGU     -      -   U      -     AGAGU 
.       110       100        90          80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Fe Fe Fe Fe Ma Ma Ma
Mature sequence

Csc-Mir-7-P14_5p

mirBase accessionNone
Sequence
0- UGGAAGACUAGUGAUUUUGUUGUU -24
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Star sequence

Csc-Mir-7-P14_3p*

mirBase accessionNone
Sequence
38- CAAAGAAUCUCUAUCUUCCGAU -60
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