MirGeneDB 3.0
MirGeneDB ID

Gsp-Mir-7

Family name MIR-7 (all species)
Seed GGAAGAC
Species Montseny horsehair worm (Gordionus sp.)
MiRBase ID
Paralogues
Orthologues Aae-Mir-7  Aca-Mir-7-P1  Aca-Mir-7-P2  Aca-Mir-7-P4  Aga-Mir-7  Agr-Mir-7  Ami-Mir-7-P1  Ami-Mir-7-P2  Ami-Mir-7-P3  Ami-Mir-7-P4  Asu-Mir-7  Ava-Mir-7-P26  Ava-Mir-7-P27  Bfl-Mir-7  Bge-Mir-7  Bko-Mir-7-P18a  Bko-Mir-7-P18b  Bko-Mir-7-P19a  Bko-Mir-7-P19b  Bla-Mir-7  Bpl-Mir-7-P18  Bpl-Mir-7-P19  Bta-Mir-7-P1  Bta-Mir-7-P2  Bta-Mir-7-P4  Cfa-Mir-7-P1  Cfa-Mir-7-P2  Cfa-Mir-7-P4  Cin-Mir-7  Cja-Mir-7-P1  Cja-Mir-7-P2  Cja-Mir-7-P4  Cli-Mir-7-P1  Cli-Mir-7-P2  Cli-Mir-7-P3  Cli-Mir-7-P4  Cmi-Mir-7-P1  Cmi-Mir-7-P2  Cmi-Mir-7-P4  Cpi-Mir-7-P1  Cpi-Mir-7-P2  Cpi-Mir-7-P3  Cpi-Mir-7-P4  Cpo-Mir-7-P1  Cpo-Mir-7-P2  Cpo-Mir-7-P4  Csc-Mir-7-P14  Csc-Mir-7-P15  Cte-Mir-7  Dan-Mir-7  Dgr-Mir-7-P24  Dgr-Mir-7-P25  Dlo-Mir-7  Dma-Mir-7  Dme-Mir-7  Dmo-Mir-7  Dno-Mir-7-P1  Dno-Mir-7-P2  Dno-Mir-7-P4  Dpu-Mir-7-P9  Dpu-Mir-7-P10  Dre-Mir-7-P1a  Dre-Mir-7-P1b  Dre-Mir-7-P2b  Dre-Mir-7-P3  Dre-Mir-7-P4b  Dsi-Mir-7  Dya-Mir-7  Eba-Mir-7  Ebu-Mir-7-P5  Ebu-Mir-7-P6  Ebu-Mir-7-P7  Ebu-Mir-7-P8  Eca-Mir-7-P1  Eca-Mir-7-P2  Eca-Mir-7-P4  Efe-Mir-7-P11  Efe-Mir-7-P12  Efe-Mir-7-P13  Egr-Mir-7-P16  Egr-Mir-7-P17  Esc-Mir-7  Ete-Mir-7-P1  Ete-Mir-7-P2  Ete-Mir-7-P4  Gga-Mir-7-P1  Gga-Mir-7-P2c  Gga-Mir-7-P2d  Gga-Mir-7-P4  Gja-Mir-7-P1  Gja-Mir-7-P2  Gja-Mir-7-P4  Gmo-Mir-7-P1a  Gmo-Mir-7-P1b  Gmo-Mir-7-P2a  Gmo-Mir-7-P3  Gmo-Mir-7-P4a  Gpa-Mir-7  Gsa-Mir-7  Hme-Mir-7  Hmi-Mir-7  Hru-Mir-7  Hsa-Mir-7-P1  Hsa-Mir-7-P2  Hsa-Mir-7-P4  Isc-Mir-7  Laf-Mir-7-P1  Laf-Mir-7-P2  Laf-Mir-7-P4  Lan-Mir-7  Lch-Mir-7-P1  Lch-Mir-7-P2  Lch-Mir-7-P3  Lch-Mir-7-P4  Lgi-Mir-7  Llo-Mir-7  Loc-Mir-7-P1  Loc-Mir-7-P2  Loc-Mir-7-P3  Loc-Mir-7-P4  Loc-Mir-7-P4-as  Lpo-Mir-7  Mal-Mir-7-P1a  Mal-Mir-7-P2a  Mal-Mir-7-P3  Mal-Mir-7-P4a  Mdo-Mir-7-P1  Mdo-Mir-7-P2  Mdo-Mir-7-P4  Mgi-Mir-7  Mml-Mir-7-P1  Mml-Mir-7-P2  Mml-Mir-7-P4  Mmr-Mir-7-P1  Mmr-Mir-7-P2  Mmr-Mir-7-P4  Mmu-Mir-7-P1  Mmu-Mir-7-P2  Mmu-Mir-7-P4  Mom-Mir-7  Mun-Mir-7-P1e  Mun-Mir-7-P1f  Mun-Mir-7-P2  Mun-Mir-7-P3  Mun-Mir-7-P4  Neu-Mir-7-P1  Neu-Mir-7-P2  Neu-Mir-7-P4  Npo-Mir-7  Oan-Mir-7-P1  Oan-Mir-7-P2  Obi-Mir-7  Ocu-Mir-7-P1  Ocu-Mir-7-P2  Ocu-Mir-7-P4  Ofu-Mir-7  Ovu-Mir-7  Pab-Mir-7-P1  Pab-Mir-7-P2  Pab-Mir-7-P4  Pau-Mir-7  Pbv-Mir-7-P1  Pbv-Mir-7-P2  Pbv-Mir-7-P4  Pca-Mir-7  Pcr-Mir-7  Pdu-Mir-7  Pfl-Mir-7  Pma-Mir-7-o1  Pma-Mir-7-o2  Pma-Mir-7-o3  Pma-Mir-7-o4  Pmi-Mir-7  Pve-Mir-7  Rno-Mir-7-P1  Rno-Mir-7-P2  Rno-Mir-7-P4  Rph-Mir-7  Sha-Mir-7-P1  Sha-Mir-7-P2  Sha-Mir-7-P4  Sko-Mir-7  Sma-Mir-7-P16  Sma-Mir-7-P17  Sme-Mir-7-P20  Sme-Mir-7-P21  Sme-Mir-7-P22  Sme-Mir-7-P23  Sne-Mir-7  Snu-Mir-7  Spt-Mir-7-P1  Spt-Mir-7-P2  Spt-Mir-7-P3  Spt-Mir-7-P4  Spu-Mir-7  Sro-Mir-7  Sto-Mir-7-P1  Sto-Mir-7-P2  Sto-Mir-7-P4  Tca-Mir-7  Tgu-Mir-7-P1  Tgu-Mir-7-P2  Tgu-Mir-7-P4  Tni-Mir-7-P3  Tur-Mir-7-P28  Tur-Mir-7-P29  War-Mir-7  Xbo-Mir-7  Xla-Mir-7-P1c  Xla-Mir-7-P1d  Xla-Mir-7-P2e  Xla-Mir-7-P2f  Xla-Mir-7-P3a  Xla-Mir-7-P3b  Xtr-Mir-7-P1  Xtr-Mir-7-P2  Xtr-Mir-7-P3 
Node of Origin (locus) Bilateria
Node of Origin (family) Bilateria
Genome context
(GCA_954871325.1_tfGorGonz1-WG_genomic)		 OX940786.1: 30056814-30057020 [+]
Precursor
(pre-Mir +30nt flank)
AAUUCAUUGACAGUGUGCAAUUGUUUCUUUUGGAAGACUAGUGAUUUUGUUGUUGUCAAAACUUGAAAAUGAUUGAUAUUAUUCGUAACUUGAAGCAUUUAAAUUGCGUUUACUUUGUUCAUCCAUUUGUAAAGCGCCAAAUUUAGGUGUUUCGAGGGAGAUUUUUUCAAUUUUAAAAGAAAAUAACAAAGUAUUCAAGAAAUAUAAAAAAUCAACAAGAAAUCACUAUCUUCUUAAAGAUGCAUUGCCUUAACUACGAUUCAAAAU
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Structure
        10           20        30        40          50        60        70        80        90       100       110       120       130  
AAUUCAUUGACAGUGUG---|   U  U     U      C         --     UUGUCAAAACUUGAAAAUGAUUGAUAUUAUUCGUAACUUGAAGCAUUUAAAUUGCGUUUACUUUGUUCAUCCAUUUGUA 
                    CAAU GU UCUUU GGAAGA UAGUGAUUU  UGUUG                                                                               A
                    GUUA CG AGAAA UCUUCU AUCACUAAA  ACAAC                                                                               A
UAAAACUUAGCAUCAAUUCC^   -  U     U      -         GA     UAAAAAAUAUAAAGAACUUAUGAAACAAUAAAAGAAAAUUUUAACUUUUUUAGAGGGAGCUUUGUGGAUUUAAACCGCG 
     260       250        240       230        220       210       200       190       180       170       160       150       140
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Wh Wh
Mature sequence

Gsp-Mir-7_5p
mirBase accessionNone
Sequence 
0- UGGAAGACUAGUGAUUUUGUUGU -23
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Star sequence

Gsp-Mir-7_3p* (predicted)
mirBase accessionNone
Sequence 
185- CAAGAAAUCACUAUCUUCUUAA -207
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