MirGeneDB 3.0
MirGeneDB ID

Dre-Mir-7-P3

Family name MIR-7 (all species)
Seed GGAAGAC
Species Zebrafish (Danio rerio)
MiRBase ID
Paralogues Dre-Mir-7-P1a  Dre-Mir-7-P1b  Dre-Mir-7-P2b  Dre-Mir-7-P4b 
Orthologues Aae-Mir-7  Aga-Mir-7  Agr-Mir-7  Ami-Mir-7-P3  Asu-Mir-7  Bfl-Mir-7  Bge-Mir-7  Bla-Mir-7  Cin-Mir-7  Cli-Mir-7-P3  Cpi-Mir-7-P3  Cte-Mir-7  Dan-Mir-7  Dlo-Mir-7  Dma-Mir-7  Dme-Mir-7  Dmo-Mir-7  Dsi-Mir-7  Dya-Mir-7  Eba-Mir-7  Esc-Mir-7  Gmo-Mir-7-P3  Gpa-Mir-7  Gsa-Mir-7  Gsp-Mir-7  Hme-Mir-7  Hmi-Mir-7  Hru-Mir-7  Isc-Mir-7  Lan-Mir-7  Lch-Mir-7-P3  Lgi-Mir-7  Llo-Mir-7  Loc-Mir-7-P3  Lpo-Mir-7  Mal-Mir-7-P3  Mgi-Mir-7  Mom-Mir-7  Mun-Mir-7-P3  Npo-Mir-7  Obi-Mir-7  Ofu-Mir-7  Ovu-Mir-7  Pau-Mir-7  Pca-Mir-7  Pcr-Mir-7  Pdu-Mir-7  Pfl-Mir-7  Pma-Mir-7-o3  Pmi-Mir-7  Pve-Mir-7  Rph-Mir-7  Sko-Mir-7  Sne-Mir-7  Snu-Mir-7  Spt-Mir-7-P3  Spu-Mir-7  Sro-Mir-7  Tca-Mir-7  Tni-Mir-7-P3  War-Mir-7  Xbo-Mir-7  Xla-Mir-7-P3a  Xla-Mir-7-P3b  Xtr-Mir-7-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(danRer11)		 chr16: 45902460-45902524 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGUUUUUUUGGGGUGUAGUCCACUGCGGUGUGGAAGACUAGUGAUUUUGUUGUUUUUUUAUGAUGGAAGGAGACAACAAGUCAUAGUCUGCCUCACGGCUCUGAGAUGAACGUCUUCAGCGCAGG
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Structure
        10         20         30        40        50        60   
AGUUUUUUUGGGGUGUA-   -| CU  G   U  A      G      U      UUUUUAUG 
                  GUC CA  GC GUG GG AGACUA UGAUUU GUUGUU        \
                  UAG GU  CG CAC CC UCUGAU ACUGAA CAACAG        A
GGACGCGACUUCUGCAAG   A^ CU  G   U  G      -      -      AGGAAGGU 
   120       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br Em Ey Gu Gu He Li Li Ov Te
Mature sequence

Dre-Mir-7-P3_5p
mirBase accessionNone
Sequence 
0- UGGAAGACUAGUGAUUUUGUUGUU -24
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Star sequence

Dre-Mir-7-P3_3p*
mirBase accessionNone
Sequence 
43- CAACAAGUCAUAGUCUGCCUCA -65
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