MirGeneDB 2.1
MirGeneDB ID

Xla-Mir-7-P3a

Family name MIR-7 (all species)
Seed GGAAGAC
Species African clawed frog (Xenopus laevis)
MiRBase ID
Paralogues Xla-Mir-7-P1c  Xla-Mir-7-P1d  Xla-Mir-7-P2e  Xla-Mir-7-P2f  Xla-Mir-7-P3b 
Orthologues Aae-Mir-7  Ami-Mir-7-P3  Asu-Mir-7  Bfl-Mir-7  Bge-Mir-7  Bla-Mir-7  Cgi-Mir-7  Cin-Mir-7  Cli-Mir-7-P3  Cpi-Mir-7-P3  Cte-Mir-7  Dan-Mir-7  Dma-Mir-7  Dme-Mir-7  Dmo-Mir-7  Dre-Mir-7-P3  Dsi-Mir-7  Dya-Mir-7  Esc-Mir-7  Gmo-Mir-7-P3  Hme-Mir-7  Isc-Mir-7  Lan-Mir-7  Lch-Mir-7-P3  Lgi-Mir-7  Loc-Mir-7-P3  Lpo-Mir-7  Mal-Mir-7-P3  Mun-Mir-7-P3  Npo-Mir-7  Obi-Mir-7  Ovu-Mir-7  Pfl-Mir-7  Pma-Mir-7-o3  Pmi-Mir-7  Sko-Mir-7  Spt-Mir-7-P3  Spu-Mir-7  Tca-Mir-7  Tni-Mir-7-P3  Xbo-Mir-7  Xtr-Mir-7-P3 
Node of Origin (locus) X. laevis
Node of Origin (family) Bilateria
Genome context
(GCF_001663975.1_XLA_v2)		 NC_030739.1: 93433012-93433077 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CAAGUUCUUCAGUUUAUUUCUGGGUCGGUUUGGAAGACUAGUGAUUUUGUUGUUUUUAUAAAAGUUUGUCACAAACAGCAAAUCGUAGUCUCCACUCUGCCCCUGGAACCUGCCCCUCCCGAGGAA
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Structure
        10         20         30        40        50        60    
CAAGUUCUUCAGUUUAU-    -|  U   UU    A     G      U      UUUAUAAAA 
                  UUCU GGG CGG  UGGA GACUA UGAUUU GUUGUU         \
                  AAGG CCC GUC  ACCU CUGAU GCUAAA CGACAA         G
AAGGAGCCCUCCCCGUCC    U^  C   UC    -     -      -      ACACUGUUU 
    120       110       100         90         80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Eg He Re St St St St
Mature sequence

Xla-Mir-7-P3a_5p
mirBase accessionNone
Sequence 
0- UGGAAGACUAGUGAUUUUGUUGUU -24
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Star sequence

Xla-Mir-7-P3a_3p* (predicted)
mirBase accessionNone
Sequence 
44- ACAGCAAAUCGUAGUCUCCACU -66
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