MirGeneDB 2.1

MirGeneDB ID

Mun-Mir-7-P3

Family name MIR-7 (all species)
Seed GGAAGAC
Species Microcaecilia (Microcaecilia unicolor)
MiRBase ID
Paralogues Mun-Mir-7-P1e  Mun-Mir-7-P1f  Mun-Mir-7-P2  Mun-Mir-7-P4 
Orthologues Aae-Mir-7  Ami-Mir-7-P3  Asu-Mir-7  Bfl-Mir-7  Bge-Mir-7  Bla-Mir-7  Cgi-Mir-7  Cin-Mir-7  Cli-Mir-7-P3  Cpi-Mir-7-P3  Cte-Mir-7  Dan-Mir-7  Dma-Mir-7  Dme-Mir-7  Dmo-Mir-7  Dre-Mir-7-P3  Dsi-Mir-7  Dya-Mir-7  Esc-Mir-7  Gmo-Mir-7-P3  Hme-Mir-7  Isc-Mir-7  Lan-Mir-7  Lch-Mir-7-P3  Lgi-Mir-7  Loc-Mir-7-P3  Lpo-Mir-7  Mal-Mir-7-P3  Npo-Mir-7  Obi-Mir-7  Ovu-Mir-7  Pfl-Mir-7  Pma-Mir-7-o3  Pmi-Mir-7  Sko-Mir-7  Spt-Mir-7-P3  Spu-Mir-7  Tca-Mir-7  Tni-Mir-7-P3  Xbo-Mir-7  Xla-Mir-7-P3a  Xla-Mir-7-P3b  Xtr-Mir-7-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(Mun_miRNA_loci)
7-P3_LR594645.1:45561062-45561326: 101-165 [+]
Precursor
(pre-Mir +30nt flank)
UCCAGAAGCUCUUCUUUUUCUGGAACAGUCUGGAAGACUAGUGAUUUUGUUGUUUUUGAUAUUAUGGAAAGAAACAACAAGUCCCAGUCUCCACACAGCCCCAGAAUCUAUCUGCAGCACCAACA
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Structure
        10          20        30        40        50        60   
UCCAGAAGCUCUUCUUU--|     AACA  C    A    AGU     U      UUUGAUAU 
                   UUCUGG    GU UGGA GACU   GAUUU GUUGUU        U
                   AAGACC    CA ACCU CUGA   CUGAA CAACAA        A
ACAACCACGACGUCUAUCU^     CCGA  C    -    CC-     -      AGAAAGGU 
   120       110       100        90          80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
 +
To
Mature sequence

Mun-Mir-7-P3_5p

mirBase accessionNone
Sequence
0- UGGAAGACUAGUGAUUUUGUUGUU -24
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Star sequence

Mun-Mir-7-P3_3p* (predicted)

mirBase accessionNone
Sequence
44- CAACAAGUCCCAGUCUCCACA -65
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