MirGeneDB 2.1
MirGeneDB ID

Pma-Mir-7-o3

Family name MIR-7 (all species)
Seed GGAAGAC
Species Sea Lamprey (Petromyzon marinus)
MiRBase ID pma-mir-7b
Paralogues Pma-Mir-7-o1  Pma-Mir-7-o2  Pma-Mir-7-o4 
Orthologues Aae-Mir-7  Ami-Mir-7-P3  Asu-Mir-7  Bfl-Mir-7  Bge-Mir-7  Bla-Mir-7  Cgi-Mir-7  Cin-Mir-7  Cli-Mir-7-P3  Cpi-Mir-7-P3  Cte-Mir-7  Dan-Mir-7  Dma-Mir-7  Dme-Mir-7  Dmo-Mir-7  Dre-Mir-7-P3  Dsi-Mir-7  Dya-Mir-7  Esc-Mir-7  Gmo-Mir-7-P3  Hme-Mir-7  Isc-Mir-7  Lan-Mir-7  Lch-Mir-7-P3  Lgi-Mir-7  Loc-Mir-7-P3  Lpo-Mir-7  Mal-Mir-7-P3  Mun-Mir-7-P3  Npo-Mir-7  Obi-Mir-7  Ovu-Mir-7  Pfl-Mir-7  Pmi-Mir-7  Sko-Mir-7  Spt-Mir-7-P3  Spu-Mir-7  Tca-Mir-7  Tni-Mir-7-P3  Xbo-Mir-7  Xla-Mir-7-P3a  Xla-Mir-7-P3b  Xtr-Mir-7-P3 
Node of Origin (locus) P. marinus
Node of Origin (family) Bilateria
Genome context
(GCF_010993605.1_kPetMar1.pri_genomic)		 NC_046120.1: 7388941-7389002 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGUGGAAAGAAGGCGGAGCUGUGGGCCAUGUGGAAGACUUGUGAUUGUGUUGUUGUAUCGCUAAAGCAGGCAACAAAUCACAGUGUUCCGCAUGGAGCGGUGCUCCUUCCAUCAGCCGCGGC
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Structure
        10            20        30        40        50        60 
GGUGGAAAGAAGGCGGA----|    GGG          G   U      G       GUAUCG 
                     GCUGU   CCAUGUGGAA ACU GUGAUU UGUUGUU      C
                     UGGCG   GGUACGCCUU UGA CACUAA ACAACGG      U
CGGCGCCGACUACCUUCCUCG^    A--          G   -      -       ACGAAA 
120       110       100          90         80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Gi Gu He Ki La Li Mo Mu Sk
Mature sequence

Pma-Mir-7-o3_5p
mirBase accessionMIMAT0019372
Sequence 
0- UGGAAGACUUGUGAUUGUGUUGUU -24
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Star sequence

Pma-Mir-7-o3_3p* (predicted)
mirBase accessionNone
Sequence 
40- CAACAAAUCACAGUGUUCCGCA -62
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