MirGeneDB 2.1
MirGeneDB ID

Tni-Mir-7-P3

Family name MIR-7 (all species)
Seed GGAAGAC
Species Pufferfish (Tetraodon nigroviridis)
MiRBase ID tni-mir-7
Paralogues
Orthologues Aae-Mir-7  Ami-Mir-7-P3  Asu-Mir-7  Bfl-Mir-7  Bge-Mir-7  Bla-Mir-7  Cgi-Mir-7  Cin-Mir-7  Cli-Mir-7-P3  Cpi-Mir-7-P3  Cte-Mir-7  Dan-Mir-7  Dma-Mir-7  Dme-Mir-7  Dmo-Mir-7  Dre-Mir-7-P3  Dsi-Mir-7  Dya-Mir-7  Esc-Mir-7  Gmo-Mir-7-P3  Hme-Mir-7  Isc-Mir-7  Lan-Mir-7  Lch-Mir-7-P3  Lgi-Mir-7  Loc-Mir-7-P3  Lpo-Mir-7  Mal-Mir-7-P3  Mun-Mir-7-P3  Npo-Mir-7  Obi-Mir-7  Ovu-Mir-7  Pfl-Mir-7  Pma-Mir-7-o3  Pmi-Mir-7  Sko-Mir-7  Spt-Mir-7-P3  Spu-Mir-7  Tca-Mir-7  Xbo-Mir-7  Xla-Mir-7-P3a  Xla-Mir-7-P3b  Xtr-Mir-7-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(Tetraodon_nigroviridis.TETRAODON8.dna.toplevel)		 8: 1820450-1820510 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
UAUUUCACAACAGCACGGUCCGGAGCAGCGUGGAAGACUAGUGAUUUUGUUGUUUGGUGUCAAAAUUGACAACAAAUCAUUGUCUUCCUCACUGCCCCGAGACGAUGCCGCAUCUGUGAAA
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Structure
        10         20         30        40        50        60 
UAUUUCACAACAGCACG-   -|  A    CGU       U        U     UUGGUGU 
                  GUC CGG GCAG   GGAAGAC AGUGAUUU GUUGU       \
                  CAG GCC CGUC   CCUUCUG UUACUAAA CAACA       C
AAAGUGUCUACGCCGUAG   A^  C    ACU       -        -     GUUAAAA 
 .       110       100        90         80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Sp Sp Sp To
Mature sequence

Tni-Mir-7-P3_5p
mirBase accessionMIMAT0003010
Sequence 
0- UGGAAGACUAGUGAUUUUGUUGU -23
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Star sequence

Tni-Mir-7-P3_3p* (predicted)
mirBase accessionNone
Sequence 
40- AACAAAUCAUUGUCUUCCUCA -61
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