MirGeneDB 3.0
MirGeneDB ID

Loc-Mir-7-P3

Family name MIR-7 (all species)
Seed GGAAGAC
Species Spotted gar (Lepisosteus oculatus)
MiRBase ID
Paralogues Loc-Mir-7-P1  Loc-Mir-7-P2  Loc-Mir-7-P4  Loc-Mir-7-P4-as 
Orthologues Aae-Mir-7  Aga-Mir-7  Agr-Mir-7  Ami-Mir-7-P3  Asu-Mir-7  Bfl-Mir-7  Bge-Mir-7  Bla-Mir-7  Cin-Mir-7  Cli-Mir-7-P3  Cpi-Mir-7-P3  Cte-Mir-7  Dan-Mir-7  Dlo-Mir-7  Dma-Mir-7  Dme-Mir-7  Dmo-Mir-7  Dre-Mir-7-P3  Dsi-Mir-7  Dya-Mir-7  Eba-Mir-7  Esc-Mir-7  Gmo-Mir-7-P3  Gpa-Mir-7  Gsa-Mir-7  Gsp-Mir-7  Hme-Mir-7  Hmi-Mir-7  Hru-Mir-7  Isc-Mir-7  Lan-Mir-7  Lch-Mir-7-P3  Lgi-Mir-7  Llo-Mir-7  Lpo-Mir-7  Mal-Mir-7-P3  Mgi-Mir-7  Mom-Mir-7  Mun-Mir-7-P3  Npo-Mir-7  Obi-Mir-7  Ofu-Mir-7  Ovu-Mir-7  Pau-Mir-7  Pca-Mir-7  Pcr-Mir-7  Pdu-Mir-7  Pfl-Mir-7  Pma-Mir-7-o3  Pmi-Mir-7  Pve-Mir-7  Rph-Mir-7  Sko-Mir-7  Sne-Mir-7  Snu-Mir-7  Spt-Mir-7-P3  Spu-Mir-7  Sro-Mir-7  Tca-Mir-7  Tni-Mir-7-P3  War-Mir-7  Xbo-Mir-7  Xla-Mir-7-P3a  Xla-Mir-7-P3b  Xtr-Mir-7-P3 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(LepOcu1)		 JH591414.1: 413803-413865 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGCACAGUUGUGUCUUGGUUCAGUGCAGUGUGGAAGACUAGUGAUUUUGUUGUUCUAAGCAUUAAAACUGACAACAAGUCACAGUCUACCUCAGGGCAUUGUGACAUCAUCAUCACCUCUGCA
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Structure
        10         20         30        40        50        60  
UGCACAGUUGUGUCUUG-   -|     AG  U  A     A       U      CUAAGCA 
                  GUU CAGUGC  UG GG AGACU GUGAUUU GUUGUU       \
                  CAG GUUACG  AC CC UCUGA CACUGAA CAACAG       U
ACGUCUCCACUACUACUA   U^     GG  U  A     -       -      UCAAAAU 
 120       110       100        90         80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Br Br He He He He Ov Ov Ov Ov Te Te Te Te To
Mature sequence

Loc-Mir-7-P3_5p
mirBase accessionNone
Sequence 
0- UGGAAGACUAGUGAUUUUGUUGUU -24
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Star sequence

Loc-Mir-7-P3_3p*
mirBase accessionNone
Sequence 
41- CAACAAGUCACAGUCUACCUCA -63
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