MirGeneDB 3.0
MirGeneDB ID

Egr-Mir-7-P16

Family name MIR-7 (all species)
Seed GGAAGAC
Species Hydatid worm (Echinococcus granulosus)
MiRBase ID egr-mir-7
Paralogues Egr-Mir-7-P17 
Orthologues Aae-Mir-7  Aga-Mir-7  Agr-Mir-7  Asu-Mir-7  Bfl-Mir-7  Bge-Mir-7  Bla-Mir-7  Cin-Mir-7  Cte-Mir-7  Dan-Mir-7  Dlo-Mir-7  Dma-Mir-7  Dme-Mir-7  Dmo-Mir-7  Dsi-Mir-7  Dya-Mir-7  Eba-Mir-7  Esc-Mir-7  Gpa-Mir-7  Gsa-Mir-7  Gsp-Mir-7  Hme-Mir-7  Hmi-Mir-7  Hru-Mir-7  Isc-Mir-7  Lan-Mir-7  Lgi-Mir-7  Llo-Mir-7  Lpo-Mir-7  Mgi-Mir-7  Mom-Mir-7  Npo-Mir-7  Obi-Mir-7  Ofu-Mir-7  Ovu-Mir-7  Pau-Mir-7  Pca-Mir-7  Pcr-Mir-7  Pdu-Mir-7  Pfl-Mir-7  Pmi-Mir-7  Pve-Mir-7  Rph-Mir-7  Sko-Mir-7  Sma-Mir-7-P16  Sne-Mir-7  Snu-Mir-7  Spu-Mir-7  Sro-Mir-7  Tca-Mir-7  War-Mir-7  Xbo-Mir-7 
Node of Origin (locus) Neodermata
Node of Origin (family) Bilateria
Genome context
(GCA_000524195.1_ASM52419v1_Egranulosus)		 APAU02000012.1: 579485-579546 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GCGUCCUGUAAUGAAAAGCCAUUGCUUUUGUGGAAGACUGGUGAUAUGUUGUAAAGCUCCCCUACCAUACAGCGUAUCGCAGUUUUUCCCUAAAAACAUUUGGCUAAUCUGCAAUUUGAAGG
Get precursor sequence
Structure
        10         20         30         40        50        60
GCGUCCUGUAAUGAAAA-    U-  C     U  -|      G            AAGCUC 
                  GCCA  UG UUUUG GG AAGACUG UGAUAUGUUGUA      C
                  CGGU  AC AAAAU CC UUUUGAC GCUAUGCGACAU      C
GGAAGUUUAACGUCUAAU    UU  A     C  U^      -            ACCAUC 
120       110       100        90        80         70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Er Er Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr Sr
Mature sequence

Egr-Mir-7-P16_5p
mirBase accessionMIMAT0020233
Sequence 
0- UGGAAGACUGGUGAUAUGUUGUA -23
Get sequence
Star sequence

Egr-Mir-7-P16_3p*
mirBase accessionMIMAT0037421
Sequence 
39- CAGCGUAUCGCAGUUUUUCCCUA -62
Get sequence