Mir-7-P19

MirGeneDB ID

Bpl-Mir-7-P19

Family name

MIR-7 (all species)

Seed

GGAAGAC

Species

Monogonont Rotifer 1 (Brachionus plicatilis)

MiRBase ID

Paralogues

Bpl-Mir-7-P18

Orthologues

Aae-Mir-7 Aga-Mir-7 Agr-Mir-7 Asu-Mir-7 Bfl-Mir-7 Bge-Mir-7 Bko-Mir-7-P19a Bko-Mir-7-P19b Bla-Mir-7 Cin-Mir-7 Cte-Mir-7 Dan-Mir-7 Dlo-Mir-7 Dma-Mir-7 Dme-Mir-7 Dmo-Mir-7 Dsi-Mir-7 Dya-Mir-7 Eba-Mir-7 Esc-Mir-7 Gpa-Mir-7 Gsa-Mir-7 Gsp-Mir-7 Hme-Mir-7 Hmi-Mir-7 Hru-Mir-7 Isc-Mir-7 Lan-Mir-7 Lgi-Mir-7 Llo-Mir-7 Lpo-Mir-7 Mgi-Mir-7 Mom-Mir-7 Npo-Mir-7 Obi-Mir-7 Ofu-Mir-7 Ovu-Mir-7 Pau-Mir-7 Pca-Mir-7 Pcr-Mir-7 Pdu-Mir-7 Pfl-Mir-7 Pmi-Mir-7 Pve-Mir-7 Rph-Mir-7 Sko-Mir-7 Sne-Mir-7 Snu-Mir-7 Spu-Mir-7 Sro-Mir-7 Tca-Mir-7 War-Mir-7 Xbo-Mir-7

Node of Origin (locus)

B. plicatilis

Node of Origin (family)

Bilateria

Genome context
(Bpl_ASM1027981)

QEOQ01000688.1: 553398-553465 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

CAACUAACAAUUUGAAAAGCUCGAUCUUUGUGGAAGACUAAUGAUUUUGUGUUUGGUUAAAAUUUGUGGUUCUUAACAUAAAAUCUAAGUUUUCCGCAAAGUCUGCUUUGAACUAACAGCUAAAAAUU

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Structure

        10            20        30        40        50        60    
CAACUAACAAUUUGAAA----|  UC  U              AAU           UGGUUAAAAU 
                     AGC  GA CUUUGUGGAAGACU   GAUUUUGUGUU          \
                     UCG  CU GAAACGCCUUUUGA   CUAAAAUACAA          U
UUAAAAAUCGACAAUCAAGUU^  U-  -              AU-           UUCUUGGUGU 
      120       110         100        90         80        70

Deep sequencing

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3' NTU

Unknown

Motifs

Tissue expression

To

Mature sequence

Bpl-Mir-7-P19_5p

mirBase accession

None

Sequence

0- UGGAAGACUAAUGAUUUUGUGUU -23

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Star sequence

Bpl-Mir-7-P19_3p* (predicted)

mirBase accession

None

Sequence

46- CAUAAAAUCUAAGUUUUCCGCA -68

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