MirGeneDB 2.1
MirGeneDB ID

Cmi-Mir-7-P1

Family name MIR-7 (all species)
Seed GGAAGAC
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-7-P2  Cmi-Mir-7-P4 
Orthologues Aae-Mir-7  Aca-Mir-7-P1  Ami-Mir-7-P1  Asu-Mir-7  Bfl-Mir-7  Bge-Mir-7  Bla-Mir-7  Bta-Mir-7-P1  Cfa-Mir-7-P1  Cgi-Mir-7  Cin-Mir-7  Cli-Mir-7-P1  Cpi-Mir-7-P1  Cpo-Mir-7-P1  Cte-Mir-7  Dan-Mir-7  Dma-Mir-7  Dme-Mir-7  Dmo-Mir-7  Dno-Mir-7-P1  Dre-Mir-7-P1a  Dre-Mir-7-P1b  Dsi-Mir-7  Dya-Mir-7  Esc-Mir-7  Ete-Mir-7-P1  Gga-Mir-7-P1  Gja-Mir-7-P1  Gmo-Mir-7-P1a  Gmo-Mir-7-P1b  Hme-Mir-7  Hsa-Mir-7-P1  Isc-Mir-7  Lan-Mir-7  Lch-Mir-7-P1  Lgi-Mir-7  Loc-Mir-7-P1  Lpo-Mir-7  Mal-Mir-7-P1a  Mdo-Mir-7-P1  Mml-Mir-7-P1  Mmu-Mir-7-P1  Mun-Mir-7-P1e  Mun-Mir-7-P1f  Npo-Mir-7  Oan-Mir-7-P1  Obi-Mir-7  Ocu-Mir-7-P1  Ovu-Mir-7  Pbv-Mir-7-P1  Pfl-Mir-7  Pma-Mir-7-o1  Pmi-Mir-7  Rno-Mir-7-P1  Sha-Mir-7-P1  Sko-Mir-7  Spt-Mir-7-P1  Spu-Mir-7  Sto-Mir-7-P1  Tca-Mir-7  Tgu-Mir-7-P1  Xbo-Mir-7  Xla-Mir-7-P1c  Xla-Mir-7-P1d  Xtr-Mir-7-P1 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI636168.1: 306565-306624 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
CUGCUGUGAUGACUGAUGUCUGGCUCAGUGUGGAAGACUAGUGAUUUUGUUGUAUAAUGAAAACUGAACAACAAAUCGCAGUCUUCCUCAUGGAUCCCGACACGUUCACCCGGUCAACAC
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Structure
        10          20        30        40        50        60
CUGCUGUGAUGACUGAU--|  U  C  A   U        A       U     AUAAUG 
                   GUC GG UC GUG GGAAGACU GUGAUUU GUUGU      A
                   CAG CC AG UAC CCUUCUGA CGCUAAA CAACA      A
CACAACUGGCCCACUUGCA^  C  U  G   U        -       -     AGUCAA 
.       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
-   +
Bl Br Ey Gi Gl He In Ki Li Mu Ov Pa Sk Sp Te Ut
Mature sequence

Cmi-Mir-7-P1_5p
mirBase accessionNone
Sequence 
0- UGGAAGACUAGUGAUUUUGUUGU -23
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Star sequence

Cmi-Mir-7-P1_3p*
mirBase accessionNone
Sequence 
39- AACAAAUCGCAGUCUUCCUCA -60
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