MirGeneDB 2.1
MirGeneDB ID

Cmi-Mir-7-P2

Family name MIR-7 (all species)
Seed GGAAGAC
Species Australian ghostshark (Callorhinchus milii)
MiRBase ID
Paralogues Cmi-Mir-7-P1  Cmi-Mir-7-P4 
Orthologues Aae-Mir-7  Aca-Mir-7-P2  Ami-Mir-7-P2  Asu-Mir-7  Bfl-Mir-7  Bge-Mir-7  Bla-Mir-7  Bta-Mir-7-P2  Cfa-Mir-7-P2  Cgi-Mir-7  Cin-Mir-7  Cli-Mir-7-P2  Cpi-Mir-7-P2  Cpo-Mir-7-P2  Cte-Mir-7  Dan-Mir-7  Dma-Mir-7  Dme-Mir-7  Dmo-Mir-7  Dno-Mir-7-P2  Dre-Mir-7-P2b  Dsi-Mir-7  Dya-Mir-7  Esc-Mir-7  Ete-Mir-7-P2  Gga-Mir-7-P2c  Gga-Mir-7-P2d  Gja-Mir-7-P2  Gmo-Mir-7-P2a  Hme-Mir-7  Hsa-Mir-7-P2  Isc-Mir-7  Lan-Mir-7  Lch-Mir-7-P2  Lgi-Mir-7  Loc-Mir-7-P2  Lpo-Mir-7  Mal-Mir-7-P2a  Mdo-Mir-7-P2  Mml-Mir-7-P2  Mmu-Mir-7-P2  Mun-Mir-7-P2  Npo-Mir-7  Oan-Mir-7-P2  Obi-Mir-7  Ocu-Mir-7-P2  Ovu-Mir-7  Pbv-Mir-7-P2  Pfl-Mir-7  Pma-Mir-7-o2  Pmi-Mir-7  Rno-Mir-7-P2  Sha-Mir-7-P2  Sko-Mir-7  Spt-Mir-7-P2  Spu-Mir-7  Sto-Mir-7-P2  Tca-Mir-7  Tgu-Mir-7-P2  Xbo-Mir-7  Xla-Mir-7-P2e  Xla-Mir-7-P2f  Xtr-Mir-7-P2 
Node of Origin (locus) Gnathostomata
Node of Origin (family) Bilateria
Genome context
(GCA_000165045.2_Callorhinchus_milii-6.1.3)		 KI636027.1: 458056-458117 [+] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGUCAACUUGGAUUGUGGUCUGGUUCUGUGUGGAAGACUAGUGAUUUUGUUGUUUUUGACAGUUGAAUGACAACAAAUCACAGUCUGCCAUAUAGCGCAGGUCAUGUCUCUCCACAGAAAGU
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Structure
        10           20        30        40        50        60 
AGUCAACUUGGAUUGUGG---|   GUU        A     A       U      UUUGAC 
                     UCUG   CUGUGUGG AGACU GUGAUUU GUUGUU      A
                     GGAC   GAUAUACC UCUGA CACUAAA CAACAG      G
UGAAAGACACCUCUCUGUACU^   GC-        G     -       -      UAAGUU 
120       110       100         90         80         70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Bl Br Ey Gi Gl He In Ki Li Mu Ov Pa Sk Sp Te Ut
Mature sequence

Cmi-Mir-7-P2_5p
mirBase accessionNone
Sequence 
0- UGGAAGACUAGUGAUUUUGUUGUU -24
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Star sequence

Cmi-Mir-7-P2_3p*
mirBase accessionNone
Sequence 
40- CAACAAAUCACAGUCUGCCAUA -62
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