MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-2-P3b

Family name MIR-2 (all species)
Seed AUCACAG
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues Gpa-Mir-2-P1-v1  Gpa-Mir-2-P1-v2  Gpa-Mir-2-P2a  Gpa-Mir-2-P2b  Gpa-Mir-2-P3a  Gpa-Mir-2-P4a-v1  Gpa-Mir-2-P4a-v2  Gpa-Mir-2-P4b-v1  Gpa-Mir-2-P4b-v2  Gpa-Mir-2-P5-v1  Gpa-Mir-2-P5-v2  Gpa-Mir-2-P6  Gpa-Mir-2-P7  Gpa-Mir-2-P8  Gpa-Mir-2-P9 
Orthologues Aae-Mir-2-P3  Aga-Mir-2-P3  Bge-Mir-2-P3-v1  Bge-Mir-2-P3-v2  Cbr-Mir-2-o3  Cel-Mir-2-o3  Dan-Mir-2-P3b  Dlo-Mir-2-P3-v1  Dlo-Mir-2-P3-v2  Dma-Mir-2-P3  Dme-Mir-2-P3b  Dmo-Mir-2-P3b  Dpu-Mir-2-P3  Dsi-Mir-2-P3b  Dya-Mir-2-P3b  Gsp-Mir-2  Hme-Mir-2-P3-v1  Hme-Mir-2-P3-v2  Isc-Mir-2-P3  Ple-Mir-2  Tca-Mir-2-P3-v1  Tca-Mir-2-P3-v2 
Node of Origin (locus) Glossinidae + Drosophilidae
Node of Origin (family) Protostomia
Genome context
(GpalI1)		 Scaffold18: 2343730-2343802 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUAAAUUUCUUUUAGCAAAGAAUUGUGUCAUUCUUCAAAGUGGCUGCGAAAUGUUGUACACAGCUCGAUUUAAUAUUCAUAUCACAGCCAGCUUUGAGGAGCGUCACAUUUCUUUCACCGAAAAAGUAUUACG
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Structure
        10          20        30        40         50        60     
AUAAAUUUCUUUUAGCA--     U    UCA          -|     C  A   UUGUACACAGC 
                   AAGAA UGUG   UUCUUCAAAG UGGCUG GA AUG           U
                   UUCUU ACAC   GAGGAGUUUC ACCGAC CU UAC           C
GCAUUAUGAAAAAGCCACU     U    UGC          G^     A  A   UUAUAAUUUAG 
 130       120       110       100        90        80        70
Deep sequencing
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3' NTU Yes
MotifsNo
Tissue expression
-   +
Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl
Star sequence

Gpa-Mir-2-P3b_5p*
mirBase accessionNone
Sequence 
0- UUCUUCAAAGUGGCUGCGAAAUG -23
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Mature sequence

Gpa-Mir-2-P3b_3p
mirBase accessionNone
Sequence 
49- UAUCACAGCCAGCUUUGAGGAGCG -73
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