MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-2-P9

Family name MIR-2 (all species)
Seed UAAGGAA
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues Gpa-Mir-2-P1-v1  Gpa-Mir-2-P1-v2  Gpa-Mir-2-P2a  Gpa-Mir-2-P2b  Gpa-Mir-2-P3a  Gpa-Mir-2-P3b  Gpa-Mir-2-P4a-v1  Gpa-Mir-2-P4a-v2  Gpa-Mir-2-P4b-v1  Gpa-Mir-2-P4b-v2  Gpa-Mir-2-P5-v1  Gpa-Mir-2-P5-v2  Gpa-Mir-2-P6  Gpa-Mir-2-P7  Gpa-Mir-2-P8 
Orthologues Asu-Mir-2-o9  Dan-Mir-2-P9  Dme-Mir-2-P9-v1  Dme-Mir-2-P9-v2  Dmo-Mir-2-P9  Dsi-Mir-2-P9-v1  Dsi-Mir-2-P9-v2  Dya-Mir-2-P9-v1  Dya-Mir-2-P9-v2  Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) Glossinidae + Drosophilidae
Node of Origin (family) Protostomia
Genome context
(GpalI1)		 Scaffold132: 422743-422809 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
AAUAAAAUAAAUAAAAUUAUAUCGAGUUAUCUAAGGAAAUAGUAGCCGUGAUUUUAUUUAACAACUUACACCAUCACAGUUGCUGUUUCUUUUAGAUAACUCGUUCUUUUAAAAACAUCUUUAAAAA
Get precursor sequence
Structure
        10        20          30         40        50        60  
AAUAAAAUAAAUAAAAUUAUAU--          -|             C     UUUAUUUAA 
                        CGAGUUAUCU AAGGAAAUAGUAGC GUGAU         C
                        GCUCAAUAGA UUUCUUUGUCGUUG CACUA         A
AAAAAUUUCUACAAAAAUUUUCUU          U^             A     CCACAUUCA 
     120       110       100        90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
-   +
Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl
Mature sequence

Gpa-Mir-2-P9_5p
mirBase accessionNone
Sequence 
0- CUAAGGAAAUAGUAGCCGUGAU -22
Get sequence
Star sequence

Gpa-Mir-2-P9_3p*
mirBase accessionNone
Sequence 
44- CACAGUUGCUGUUUCUUUUAGAU -67
Get sequence