MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-2-P8

Family name MIR-2 (all species)
Seed ACAGUAU
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues Gpa-Mir-2-P1-v1  Gpa-Mir-2-P1-v2  Gpa-Mir-2-P2a  Gpa-Mir-2-P2b  Gpa-Mir-2-P3a  Gpa-Mir-2-P3b  Gpa-Mir-2-P4a-v1  Gpa-Mir-2-P4a-v2  Gpa-Mir-2-P4b-v1  Gpa-Mir-2-P4b-v2  Gpa-Mir-2-P5-v1  Gpa-Mir-2-P5-v2  Gpa-Mir-2-P6  Gpa-Mir-2-P7  Gpa-Mir-2-P9 
Orthologues Aae-Mir-2-P8  Aga-Mir-2-P8  Asu-Mir-2-o8  Dan-Mir-2-P8  Dme-Mir-2-P8-v1  Dme-Mir-2-P8-v2  Dmo-Mir-2-P8  Dsi-Mir-2-P8  Dya-Mir-2-P8  Gsp-Mir-2  Hme-Mir-2-P8  Ple-Mir-2  Tca-Mir-2-P8 
Node of Origin (locus) Aparaglossata
Node of Origin (family) Protostomia
Genome context
(GpalI1)		 Scaffold249: 70399-70463 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GUAAAUGCAUUCUCCCCUCUAUGUUCGACCCACAGUAUAUUUUUGUGUUUUUGUGUAAAUUUAACAAAAGUCAAAUCACAGGAUUAUACUGUGAGUUGUGUAGGGUGAAAAACAUCUUAAUAUCU
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Structure
        10            20        30        40        50        60  
GUAAAUGCAUUCUCCCC----|    GUU    C         U       UU    UGUAAAUU 
                     UCUAU   CGAC CACAGUAUA UUUUGUG  UUUG        U
                     GGAUG   GUUG GUGUCAUAU AGGACAC  AAAC        A
UCUAUAAUUCUACAAAAAGUG^    U--    A         U       U-    UGAAAACA 
   120       110       100          90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl
Mature sequence

Gpa-Mir-2-P8_5p
mirBase accessionNone
Sequence 
0- CACAGUAUAUUUUUGUGUUUUUG -23
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Star sequence

Gpa-Mir-2-P8_3p*
mirBase accessionNone
Sequence 
43- AAUCACAGGAUUAUACUGUGAG -65
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