MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-2-P8

Family name MIR-2 (all species)
Seed AUCACAG
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-308
Paralogues Tca-Mir-2-P1-v1  Tca-Mir-2-P1-v2  Tca-Mir-2-P2a  Tca-Mir-2-P2b  Tca-Mir-2-P3-v1  Tca-Mir-2-P3-v2  Tca-Mir-2-P4-v1  Tca-Mir-2-P4-v2  Tca-Mir-2-P5c  Tca-Mir-2-P5d  Tca-Mir-2-P5e  Tca-Mir-2-P7 
Orthologues Aae-Mir-2-P8  Aga-Mir-2-P8  Asu-Mir-2-o8  Dan-Mir-2-P8  Dme-Mir-2-P8-v1  Dme-Mir-2-P8-v2  Dmo-Mir-2-P8  Dsi-Mir-2-P8  Dya-Mir-2-P8  Gpa-Mir-2-P8  Gsp-Mir-2  Hme-Mir-2-P8  Ple-Mir-2 
Node of Origin (locus) Aparaglossata
Node of Origin (family) Protostomia
Genome context
(Tcas5.2)		 LG2: 4737006-4737062 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CACAGUUCAAAUGGGGUAAUUGGCGCCCUGCGCAGGAUUUGCUUGUGAAUGGGUGUGCUUGAUUCAAUCACAGGAAAAUUCUGUGCGGGGAGUUGGUUUUGUCACCACAGGCAAGUU
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Structure
        10          20        30        40        50        
CACAGUUCAAAUGGGGU--|  UG  G               G       A   GUGUG 
                   AAU  GC CCCUGCGCAGGAUUU CUUGUGA UGG     \
                   UUG  UG GGGGCGUGUCUUAAA GGACACU ACU     C
UUGAACGGACACCACUGUU^  GU  A               A       A   UAGUU 
     110       100        90        80        70        60
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-2-P8_5p*
mirBase accessionMIMAT0018706
Sequence 
0- CGCAGGAUUUGCUUGUGAAUGG -22
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Mature sequence

Tca-Mir-2-P8_3p
mirBase accessionMIMAT0018707
Sequence 
35- AAUCACAGGAAAAUUCUGUGCG -57
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