Mir-2-P7

MirGeneDB ID

Hme-Mir-2-P7

Family name

MIR-2 (all species)

Seed

AUCACAG

Species

Longwing butterfly (Heliconius melpomene)

MiRBase ID

hme-mir-11

Paralogues

Hme-Mir-2-P1-v1 Hme-Mir-2-P1-v2 Hme-Mir-2-P2a Hme-Mir-2-P2b Hme-Mir-2-P3-v1 Hme-Mir-2-P3-v2 Hme-Mir-2-P4 Hme-Mir-2-P8

Orthologues

Aae-Mir-2-P7 Aga-Mir-2-P7 Asu-Mir-2-o7a Asu-Mir-2-o7b Bge-Mir-2-P7 Dan-Mir-2-P7 Dlo-Mir-2-P7 Dme-Mir-2-P7 Dmo-Mir-2-P7 Dsi-Mir-2-P7 Dya-Mir-2-P7 Gpa-Mir-2-P7 Gsp-Mir-2 Ple-Mir-2 Tca-Mir-2-P7

Node of Origin (locus)

Neoptera

Node of Origin (family)

Protostomia

Genome context
(Hmel_1)

HE672080: 326757-326812 [-] Ensembl

Clustered miRNAs
(< 50kb from Mir-2-P7)

Mir-29-P2h HE672080: 325259-325313 [-] Ensembl
Mir-2-P7 HE672080: 326757-326812 [-] Ensembl

Precursor
(pre-Mir +30nt flank)

CUGGCUGGCUGCGGUCACCGCGUCCCGUGGCUAGUACUCGCGCUGUGACAUGUGUUGCCAGCCACAUCACAGUCAGAGUUCUAGCUAUACGGCGCGGUUCAUCGGCGGUACUAUAG

Get precursor sequence

Structure

        10          20        30        40        50        
CUGGCUGGCUGCGGUCA--|      CC        U    GC       CA    UUG 
                   CCGCGUC  GUGGCUAG ACUC  GCUGUGA  UGUG   C
                   GGCGCGG  UAUCGAUC UGAG  UGACACU  ACAC   C
GAUAUCAUGGCGGCUACUU^      CA        U    AC       --    CGA 
    110       100        90        80        70          60

Deep sequencing

Go to detailed chart

3' NTU

Motifs

CNNC at 3p(+17)

Tissue expression

Ad	Fe	Fe	Fe	Fe	Ma	Ma

Star sequence

Hme-Mir-2-P7_5p*

mirBase accession

None

Sequence

0- CUAGUACUCGCGCUGUGACAUGUG -24

Get sequence

Mature sequence

Hme-Mir-2-P7_3p

mirBase accession

MIMAT0024934

Sequence

34- CAUCACAGUCAGAGUUCUAGCU -56

Get sequence