MirGeneDB 3.0
MirGeneDB ID

Asu-Mir-2-o11c

Family name MIR-2 (all species)
Seed AUCACAG
Species Large roundworm (Ascaris suum)
MiRBase ID asu-mir-43c-2
Paralogues Asu-Mir-2-o6  Asu-Mir-2-o7a  Asu-Mir-2-o7b  Asu-Mir-2-o8  Asu-Mir-2-o9  Asu-Mir-2-o10  Asu-Mir-2-o11a  Asu-Mir-2-o11b  Asu-Mir-2-o11d  Asu-Mir-2-P11 
Orthologues Cbr-Mir-2-P11  Cel-Mir-2-P11  Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) A.suum
Node of Origin (family) Protostomia
Genome context
(ASU_PRJNA80881_plustraces)		 Scaffold1171: 26596-26653 [+]
Precursor
(pre-Mir +30nt flank)
UACCGGCGAAACCAGGUGUGUACAGCGGCGCGUGGCAAAGAUACUGCGAUGCGCCGCGUUACAUCGUAUCACAGUUCUUUGUCACCCUUUGCCUUACGCAUAUUUUCCACAAAACCAU
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Structure
        10          20        30        40        50         
UACCGGCGAAACCAGGU--|    CA    CGC          U    C      CCGCG 
                   GUGUA  GCGG   GUGGCAAAGA ACUG GAUGCG     \
                   CGCAU  CGUU   CACUGUUUCU UGAC CUAUGC     U
UACCAAAACACCUUUUAUA^    UC    UCC          -    A      UACAU 
      110       100        90        80         70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Ce Em Em Em Em Em Em Em Em Em Em La Ov Se Sp Te Zy
Star sequence

Asu-Mir-2-o11c_5p* (predicted)
mirBase accessionMIMAT0022671
Sequence 
0- CGUGGCAAAGAUACUGCGAUGCG -23
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Mature sequence

Asu-Mir-2-o11c_3p
mirBase accessionMIMAT0021454
Sequence 
36- UAUCACAGUUCUUUGUCACCCU -58
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