MirGeneDB 3.0
MirGeneDB ID

Cel-Mir-2-P11

Family name MIR-2 (all species)
Seed AUCACAG
Species Roundworm (Caenorhabditis elegans)
MiRBase ID cel-mir-250
Paralogues Cel-Mir-2-o3  Cel-Mir-2-o4  Cel-Mir-2-o5 
Orthologues Asu-Mir-2-o11a  Asu-Mir-2-o11b  Asu-Mir-2-o11c  Asu-Mir-2-o11d  Asu-Mir-2-P11  Cbr-Mir-2-P11  Gsp-Mir-2  Ple-Mir-2 
Node of Origin (locus) Chromadorea
Node of Origin (family) Protostomia
Genome context
(ce11)		 chrV: 11769936-11769998 [-] UCSC Ensembl
Clustered miRNAs
(< 50kb from Mir-2-P11)		 Mir-2-P11 chrV: 11769936-11769998 [-] UCSC Ensembl
Mir-279-P12 chrV: 11770076-11770132 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
ACUACUAUAUUCAAGGGUCUUCGGACCACGCCUUCAGUUGCCUCGUGAUCCGCCAAACACAAUAAAUGGACGAAUCACAGUCAACUGUUGGCAUGGUGCUCGUACCCAUUUUGUAAGUUAACA
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Structure
        10        20          30        40        50        60 
ACUACUAUAUUCAAGGGUCUU  - -|   C   UU      C  C     C  CCAAACAC 
                     CG G ACCA GCC  CAGUUG CU GUGAU CG        A
                     GC C UGGU CGG  GUCAAC GA CACUA GC        A
ACAAUUGAAUGUUUUACCCAU  U G^   A   UU      U  -     A  AGGUAAAU 
 120       110       100        90        80         70
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Da Ea Mi Wi Yo Yo
Star sequence

Cel-Mir-2-P11_5p*
mirBase accessionMIMAT0020339
Sequence 
0- CCUUCAGUUGCCUCGUGAUCCG -22
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Mature sequence

Cel-Mir-2-P11_3p
mirBase accessionMIMAT0000306
Sequence 
42- AAUCACAGUCAACUGUUGGCA -63
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Proposed targets microrna.org: MIMAT0000306
TargetScanWorm: cel-miR-250