MirGeneDB 3.0

MirGeneDB ID

Dlo-Mir-3

Family name MIR-3 (all species)
Seed CACUGGG
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues
Orthologues Aae-Mir-3-o1a  Aae-Mir-3-o1b  Aae-Mir-3-o2  Aga-Mir-3-o1  Aga-Mir-3-o2  Bge-Mir-3-P28a-v1  Bge-Mir-3-P28a-v2  Bge-Mir-3-P28b-v1  Bge-Mir-3-P28b-v2  Bge-Mir-3-P29-v1  Bge-Mir-3-P29-v2  Dan-Mir-3-P1  Dan-Mir-3-P2  Dan-Mir-3-P3  Dma-Mir-3  Dme-Mir-3-P1  Dme-Mir-3-P2  Dme-Mir-3-P3  Dmo-Mir-3-P1  Dmo-Mir-3-P2  Dmo-Mir-3-P3  Dpu-Mir-3  Dsi-Mir-3-P1  Dsi-Mir-3-P2  Dsi-Mir-3-P3  Dya-Mir-3-P1  Dya-Mir-3-P2  Dya-Mir-3-P3  Gpa-Mir-3  Hme-Mir-3-P14  Hme-Mir-3-P15  Hme-Mir-3-P16  Hme-Mir-3-P17  Hme-Mir-3-P18  Hme-Mir-3-P19  Hme-Mir-3-P20  Hme-Mir-3-P21  Hme-Mir-3-P22  Hme-Mir-3-P23  Hme-Mir-3-P24  Hme-Mir-3-P25  Hme-Mir-3-P26  Hme-Mir-3-P27  Tca-Mir-3-P4  Tca-Mir-3-P5  Tca-Mir-3-P6  Tca-Mir-3-P7-v1  Tca-Mir-3-P7-v2  Tca-Mir-3-P8  Tca-Mir-3-P9a  Tca-Mir-3-P9b  Tca-Mir-3-P10  Tca-Mir-3-P11  Tca-Mir-3-P12a  Tca-Mir-3-P12b  Tca-Mir-3-P13a  Tca-Mir-3-P13b 
Node of Origin (locus) Pancrustacea
Node of Origin (family) Pancrustacea
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)
NC_087241.1: 4525806-4525867 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
AUUAUGGUGAACGAAAAUCAGUGUAGAAUGGGAUCGACUUGGCUCAGGUUGACGGUGAAAAAAAAAAUUGUCACUGGGUUAAGUUUGUCCCAUACGUUCACUUAGCGAACAUCAGAUCCAUC
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Structure
        10         20         30        40        50        60 
AUUAUGGUGAACGAAAAUC-    UAGA-|      C            GU   CGGUGAAA 
                    AGUG     AUGGGAU GACUUGGCUCAG  UGA        A
                    UCAC     UACCCUG UUGAAUUGGGUC  ACU        A
CUACCUAGACUACAAGCGAU    UUGCA^      U            --   GUUAAAAA 
120       110       100        90        80          70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Sr Sr
Star sequence

Dlo-Mir-3_5p* (predicted)

mirBase accessionNone
Sequence
0- GGAUCGACUUGGCUCAGGUUGA -22
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Mature sequence

Dlo-Mir-3_3p

mirBase accessionNone
Sequence
40- UCACUGGGUUAAGUUUGUCCCA -62
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