MirGeneDB 3.0
MirGeneDB ID

Aae-Mir-3-o2

Family name MIR-3 (all species)
Seed CACUGGG
Species Yellow fever mosquito (Aedes aegypti)
MiRBase ID aae-mir-309b
Paralogues Aae-Mir-3-o1a  Aae-Mir-3-o1b 
Orthologues Aga-Mir-3-o2  Dan-Mir-3-P2  Dlo-Mir-3  Dma-Mir-3  Dme-Mir-3-P2  Dmo-Mir-3-P2  Dpu-Mir-3  Dsi-Mir-3-P2  Dya-Mir-3-P2  Gpa-Mir-3 
Node of Origin (locus) Culicidae
Node of Origin (family) Pancrustacea
Genome context
(Aaeg_L3)		 supercont1.464: 825634-825696 [+] Ensembl
Clustered miRNAs
(< 50kb from Mir-3-o2)		 Mir-279-P1a supercont1.464: 825007-825079 [+] Ensembl
Mir-3-o2 supercont1.464: 825634-825696 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UGAGUGUAGAUGAAAGAAACCCGGCUUAUGCGUCAAACUCCGUUCAGUUGGUGGAGUCAUUUUCCAAGUCAUCACUGGGCAUAGUUUGUCGCAUAAUUAAAAACUAUAUCAACUUUUAUCGUU
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Structure
        10        20          30        40        50        60 
UGAGUGUAGAUGAAAGAAACCCGGC--|      U      CC       U    GAGUCAU 
                           UUAUGCG CAAACU  GUUCAGU GGUG       U
                           AAUACGC GUUUGA  CGGGUCA CUAC       U
UUGCUAUUUUCAACUAUAUCAAAAAUU^      U      UA       -    UGAACCU 
 120       110       100        90        80         70
Deep sequencing
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3' NTU Unknown
MotifsCNNC at 3p(+17)
Tissue expression
-   +
Ge Ge So So To To To
Star sequence

Aae-Mir-3-o2_5p* (predicted)
mirBase accessionMIMAT0014319
Sequence 
0- CGUCAAACUCCGUUCAGUUGGUG -23
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Mature sequence

Aae-Mir-3-o2_3p
mirBase accessionMIMAT0014320
Sequence 
41- UCACUGGGCAUAGUUUGUCGCA -63
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