| MirGeneDB ID | Dmo-Mir-3-P3 |
|---|
| Family name |
MIR-3 (all species) |
|---|
| Seed |
CACUGGG |
|---|
| Species |
Fruit fly (Drosophila mojavensis) |
|---|
| MiRBase ID |
dmo-mir-318
|
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| Paralogues |
Dmo-Mir-3-P1
Dmo-Mir-3-P2
|
|---|
| Orthologues |
Dan-Mir-3-P3
Dlo-Mir-3
Dma-Mir-3
Dme-Mir-3-P3
Dpu-Mir-3
Dsi-Mir-3-P3
Dya-Mir-3-P3
Gpa-Mir-3
|
|---|
| Node of Origin (locus) |
Drosophila
|
|---|
| Node of Origin (family) |
Pancrustacea
|
|---|
Genome context
(Dmoj_caf1) |
scaffold_6540: 5225350-5225408 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UUGAAAUGUGAUUAAGGAUUUCAAUUUAUGGGAUACACUAAGUUCAGUUUUGUCAGAUGUCCAAGCAUCACUGGGCUUUGUUUAUCUCAUAAGAGCGAAAUUUGUUCAACUUACGGGAC
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50
UUGAAAUGUGAUUAAGG- AA-| C U UU UCAGAU
AUUUC UUUAUGGGAUA AC AAGUUCAGU UG \
UAAAG GAAUACUCUAU UG UUCGGGUCA AC G
CAGGGCAUUCAACUUGUU CGA^ U U CU GAACCU
110 100 90 80 70 60 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
|
|---|
| Star sequence |
Dmo-Mir-3-P3_5p* (predicted) |
| mirBase accession | None |
|---|
| Sequence |
0- GGAUACACUAAGUUCAGUUUUG -22
Get sequence
|
|---|
| Mature sequence |
Dmo-Mir-3-P3_3p |
| mirBase accession | MIMAT0008684 |
|---|
| Sequence |
37- UCACUGGGCUUUGUUUAUCUCA -59
Get sequence
|
|---|
