| MirGeneDB ID | Aae-Mir-11899-P2 |
|---|
| Family name |
MIR-11899 (all species) |
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| Seed |
AUGUAUG |
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| Species |
Yellow fever mosquito (Aedes aegypti) |
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| MiRBase ID |
aae-mir-11899-2
|
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| Paralogues |
Aae-Mir-11899-P1
|
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| Orthologues |
|
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| Node of Origin (locus) |
A. aegypti
|
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| Node of Origin (family) |
A. aegypti
|
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Genome context
(Aaeg_L3) |
supercont1.1446: 67711-67773 [-]
Ensembl
|
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Precursor
(pre-Mir +30nt flank) |
CCCUUAUGUAGGCCAUUUUUUCUACUGUUCCAUGUAUGAUUUCGGUCAUGUAUGCAGUUGAAAAUAAUUAUAUGACCGAUUUAAUAUAUGGCUCAGUGGUUAUGAAAAAUCAUCAAACCCAAA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
CCCUUAUGUAGGCCAUUUUUU---| UU GAUU UGCAGUU
CUACUG CCAUGUAU UCGGUCAUGUA G
GGUGAC GGUAUAUA AGCCAGUAUAU A
AAACCCAAACUACUAAAAAGUAUU^ UC AUUU UAAUAAA
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
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| 3' NTU |
No
|
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
|
|
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| Mature sequence |
Aae-Mir-11899-P2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- CAUGUAUGAUUUCGGUCAUGUA -22
Get sequence
|
|---|
| Star sequence |
Aae-Mir-11899-P2_3p* |
| mirBase accession | MIMAT0045998 |
|---|
| Sequence |
40- UAUGACCGAUUUAAUAUAUGGCU -63
Get sequence
|
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