MirGeneDB ID | Aae-Mir-927-P1 |
Family name |
MIR-927 (all species) |
Seed |
UUAGAAU |
Species |
Yellow fever mosquito (Aedes aegypti) |
MiRBase ID |
aae-mir-927
|
Paralogues |
Aae-Mir-927-P2
|
Orthologues |
Aga-Mir-927-P1
Bge-Mir-927-P1
Dan-Mir-927-P1
Dlo-Mir-927-P1
Dme-Mir-927-P1
Dmo-Mir-927-P1
Dsi-Mir-927-P1
Dya-Mir-927-P1
Gpa-Mir-927-P1-v1
Gpa-Mir-927-P1-v2
Hme-Mir-927-P1
Tca-Mir-927-P1
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Neoptera
|
Genome context (Aaeg_L3) |
supercont1.26: 2065419-2065482 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CGAAAAAAAAAAUAUCUGUUGAUGGUUUGCUUUAGAAUUCCUACGCUUUACCGUGAUUUGUUGAAAGUUUGGCAAAGCGUUUGGGUUCUGAAACGAAACAUUAAUCAUCCCCAGCACCAGAGAC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CGAAAAAAAAAAUAUCU--| G C CU A GUGAUUUG
GUUGAUG UUUG UUUAGAAUUC ACGCUUU CC U
UAAUUAC AAGC AAGUCUUGGG UGCGAAA GG U
CAGAGACCACGACCCCUAC^ A A UU C UUUGAAAG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UG at 5p(-14), CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Mature sequence |
Aae-Mir-927-P1_5p |
mirBase accession | None |
Sequence |
0- UUUAGAAUUCCUACGCUUUACC -22
Get sequence
|
Star sequence |
Aae-Mir-927-P1_3p* |
mirBase accession | MIMAT0014271 |
Sequence |
42- CAAAGCGUUUGGGUUCUGAAAC -64
Get sequence
|