MirGeneDB ID | Aga-Mir-927-P1 |
Family name |
MIR-927 (all species) |
Seed |
UUAGAAU |
Species |
African malaria mosquito (Anopheles gambiae) |
MiRBase ID |
aga-mir-927
|
Paralogues |
Aga-Mir-927-P2
|
Orthologues |
Aae-Mir-927-P1
Bge-Mir-927-P1
Dan-Mir-927-P1
Dlo-Mir-927-P1
Dme-Mir-927-P1
Dmo-Mir-927-P1
Dsi-Mir-927-P1
Dya-Mir-927-P1
Gpa-Mir-927-P1-v1
Gpa-Mir-927-P1-v2
Hme-Mir-927-P1
Tca-Mir-927-P1
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Neoptera
|
Genome context (GCF_943734735.2_idAnoGambNW_F1_1_genomic) |
NC_064600.1: 19053229-19053291 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AAAGUCACGCUGCUUUAGUUAAUGGUUUGUUUUAGAAUUCCUACGCUUUACCCGUGAUUAAAGUAGUGCGGCAAAGCGUUUGGAUUCUGAAACGAAACGUUAACAACGCCAUAGCUUCACAGC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AAAGUCACGCUGCUUUA--| G CU A CGUGAUUA
GUUAAUG UUUGUUUUAGAAUUC ACGCUUU CC \
CAAUUGC AAGCAAAGUCUUAGG UGCGAAA GG A
CGACACUUCGAUACCGCAA^ A UU C CGUGAUGA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
Ab |
Ab |
He |
He |
Mi |
Mi |
Ov |
Ov |
Ov |
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Mature sequence |
Aga-Mir-927-P1_5p |
mirBase accession | MIMAT0010102 |
Sequence |
0- UUUAGAAUUCCUACGCUUUACC -22
Get sequence
|
Star sequence |
Aga-Mir-927-P1_3p* |
mirBase accession | None |
Sequence |
41- CAAAGCGUUUGGAUUCUGAAAC -63
Get sequence
|