| MirGeneDB ID | Gpa-Mir-927-P1-v2 |
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| Family name |
MIR-927 (all species) |
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| Seed |
UUUAGAA |
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| Species |
Tsetse fly (Glossina pallidipes) |
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| MiRBase ID |
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| Paralogues |
Gpa-Mir-927-P1-v1
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| Orthologues |
Aae-Mir-927-P1
Aga-Mir-927-P1
Bge-Mir-927-P1
Dan-Mir-927-P1
Dlo-Mir-927-P1
Dme-Mir-927-P1
Dmo-Mir-927-P1
Dsi-Mir-927-P1
Dya-Mir-927-P1
Hme-Mir-927-P1
Tca-Mir-927-P1
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| Node of Origin (locus) |
Neoptera
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| Node of Origin (family) |
Neoptera
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Genome context
(GpalI1) |
Scaffold91: 322630-322692 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UUUUUUUUUGACACUCGUGGACAUACUUUGAUUUAGAAUUCCUACGCUUUACCUUAUGAUCUGAAAUUGGCAAAGCGUUUGGAUUCUGAAACAAAUUGUCUCCUCUAAUUCAACGAUUGCACA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
UUUUUUUUUGACACUCGU--| C C A CU A UUAUGAU
GGA AUA UUUG UUUAGAAUUC ACGCUUU CC \
CCU UGU AAAC AAGUCUUAGG UGCGAAA GG C
ACACGUUAGCAACUUAAUCU^ C U A UU C UUAAAGU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | CNNC at 3p(+17) |
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Tissue expression
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| Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
Gl |
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| Mature sequence |
Gpa-Mir-927-P1-v2_5p |
| mirBase accession | None |
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| Sequence |
0- AUUUAGAAUUCCUACGCUUUACC -23
Get sequence
|
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| Star sequence |
Gpa-Mir-927-P1-v2_3p* |
| mirBase accession | None |
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| Sequence |
40- CAAAGCGUUUGGAUUCUGAAACA -63
Get sequence
|
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