| MirGeneDB ID | Gpa-Mir-927-P1-v2 |
|---|
| Family name |
MIR-927 (all species) |
|---|
| Seed |
UUUAGAA |
|---|
| Species |
Tsetse fly (Glossina pallidipes) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Gpa-Mir-927-P1-v1
|
|---|
| Orthologues |
Aae-Mir-927-P1
Aga-Mir-927-P1
Bge-Mir-927-P1
Dan-Mir-927-P1
Dlo-Mir-927-P1
Dme-Mir-927-P1
Dmo-Mir-927-P1
Dsi-Mir-927-P1
Dya-Mir-927-P1
Hme-Mir-927-P1
Tca-Mir-927-P1
|
|---|
| Node of Origin (locus) |
Neoptera
|
|---|
| Node of Origin (family) |
Neoptera
|
|---|
Genome context
(GpalI1) |
Scaffold91: 322630-322692 [-]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
UUUUUUUUUGACACUCGUGGACAUACUUUGAUUUAGAAUUCCUACGCUUUACCUUAUGAUCUGAAAUUGGCAAAGCGUUUGGAUUCUGAAACAAAUUGUCUCCUCUAAUUCAACGAUUGCACA
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
UUUUUUUUUGACACUCGU--| C C A CU A UUAUGAU
GGA AUA UUUG UUUAGAAUUC ACGCUUU CC \
CCU UGU AAAC AAGUCUUAGG UGCGAAA GG C
ACACGUUAGCAACUUAAUCU^ C U A UU C UUAAAGU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17) |
|---|
Tissue expression
|
| To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
To |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Gpa-Mir-927-P1-v2_5p |
| mirBase accession | None |
|---|
| Sequence |
0- AUUUAGAAUUCCUACGCUUUACC -23
Get sequence
|
|---|
| Star sequence |
Gpa-Mir-927-P1-v2_3p* |
| mirBase accession | None |
|---|
| Sequence |
40- CAAAGCGUUUGGAUUCUGAAACA -63
Get sequence
|
|---|
