MirGeneDB 3.0

MirGeneDB ID

Dsi-Mir-927-P1

Family name MIR-927 (all species)
Seed UUAGAAU
Species Fruit fly (Drosophila simulans)
MiRBase ID
Paralogues
Orthologues Aae-Mir-927-P1  Aga-Mir-927-P1  Bge-Mir-927-P1  Dan-Mir-927-P1  Dlo-Mir-927-P1  Dme-Mir-927-P1  Dmo-Mir-927-P1  Dya-Mir-927-P1  Gpa-Mir-927-P1-v1  Gpa-Mir-927-P1-v2  Hme-Mir-927-P1  Tca-Mir-927-P1 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)
X: 15019725-15019786 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AGCCAUAUUAAAUUGUGGAUGCUGUAGAGUUUUAGAAUUCCUACGCUUUACCGUGGCAUACGAAAUUCGGCAAAGCGUUUGGAUUCUGAAACCCUAUCGAUCCAUUAUCAUGUUAUUAACAA
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Structure
        10           20        30        40        50        60
AGCCAUAUUAAAUUGUG---|  GCU    A            CU       A  GUGGCAU 
                    GAU   GUAG GUUUUAGAAUUC  ACGCUUU CC       A
                    CUA   UAUC CAAAGUCUUAGG  UGCGAAA GG       C
AACAAUUAUUGUACUAUUAC^  GC-    C            UU       C  CUUAAAG 
120       110       100         90        80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
He Wh
Mature sequence

Dsi-Mir-927-P1_5p

mirBase accessionNone
Sequence
0- UUUAGAAUUCCUACGCUUUACC -22
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Star sequence

Dsi-Mir-927-P1_3p*

mirBase accessionNone
Sequence
40- CAAAGCGUUUGGAUUCUGAAAC -62
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