MirGeneDB ID | Dsi-Mir-927-P1 |
Family name |
MIR-927 (all species) |
Seed |
UUAGAAU |
Species |
Fruit fly (Drosophila simulans) |
MiRBase ID |
|
Paralogues |
|
Orthologues |
Aae-Mir-927-P1
Aga-Mir-927-P1
Bge-Mir-927-P1
Dan-Mir-927-P1
Dlo-Mir-927-P1
Dme-Mir-927-P1
Dmo-Mir-927-P1
Dya-Mir-927-P1
Gpa-Mir-927-P1-v1
Gpa-Mir-927-P1-v2
Hme-Mir-927-P1
Tca-Mir-927-P1
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Neoptera
|
Genome context (Drosophila_simulans.ASM75419v3.dna.toplevel) |
X: 15019725-15019786 [-]
UCSC
Ensembl
|
Precursor (pre-Mir +30nt flank) |
AGCCAUAUUAAAUUGUGGAUGCUGUAGAGUUUUAGAAUUCCUACGCUUUACCGUGGCAUACGAAAUUCGGCAAAGCGUUUGGAUUCUGAAACCCUAUCGAUCCAUUAUCAUGUUAUUAACAA
Get precursor sequence
|
Structure | 10 20 30 40 50 60
AGCCAUAUUAAAUUGUG---| GCU A CU A GUGGCAU
GAU GUAG GUUUUAGAAUUC ACGCUUU CC A
CUA UAUC CAAAGUCUUAGG UGCGAAA GG C
AACAAUUAUUGUACUAUUAC^ GC- C UU C CUUAAAG
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | UGUG in loop |
Tissue expression
|
|
Mature sequence |
Dsi-Mir-927-P1_5p |
mirBase accession | None |
Sequence |
0- UUUAGAAUUCCUACGCUUUACC -22
Get sequence
|
Star sequence |
Dsi-Mir-927-P1_3p* |
mirBase accession | None |
Sequence |
40- CAAAGCGUUUGGAUUCUGAAAC -62
Get sequence
|