MirGeneDB 3.0

MirGeneDB ID

Gpa-Mir-927-P1-v1

Family name MIR-927 (all species)
Seed UUAGAAU
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues Gpa-Mir-927-P1-v2 
Orthologues Aae-Mir-927-P1  Aga-Mir-927-P1  Bge-Mir-927-P1  Dan-Mir-927-P1  Dlo-Mir-927-P1  Dme-Mir-927-P1  Dmo-Mir-927-P1  Dsi-Mir-927-P1  Dya-Mir-927-P1  Hme-Mir-927-P1  Tca-Mir-927-P1 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(GpalI1)
Scaffold91: 322631-322691 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUUUUUGACACUCGUGGACAUACUUUGAUUUAGAAUUCCUACGCUUUACCUUAUGAUCUGAAAUUGGCAAAGCGUUUGGAUUCUGAAACAAAUUGUCUCCUCUAAUUCAACGAUUGCAC
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Structure
        10          20        30        40        50          
UUUUUUUUGACACUCGU--|  C   C    A          CU       A  UUAUGAU 
                   GGA AUA UUUG UUUAGAAUUC  ACGCUUU CC       \
                   CCU UGU AAAC AAGUCUUAGG  UGCGAAA GG       C
CACGUUAGCAACUUAAUCU^  C   U    A          UU       C  UUAAAGU 
 .       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14)
Tissue expression
 +
Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl
Mature sequence

Gpa-Mir-927-P1-v1_5p

mirBase accessionNone
Sequence
0- UUUAGAAUUCCUACGCUUUACC -22
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Star sequence

Gpa-Mir-927-P1-v1_3p*

mirBase accessionNone
Sequence
39- CAAAGCGUUUGGAUUCUGAAAC -61
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