MirGeneDB 3.0

MirGeneDB ID

Dan-Mir-927-P1

Family name MIR-927 (all species)
Seed UUAGAAU
Species Fruit fly (Drosophila ananassae)
MiRBase ID
Paralogues
Orthologues Aae-Mir-927-P1  Aga-Mir-927-P1  Bge-Mir-927-P1  Dlo-Mir-927-P1  Dme-Mir-927-P1  Dmo-Mir-927-P1  Dsi-Mir-927-P1  Dya-Mir-927-P1  Gpa-Mir-927-P1-v1  Gpa-Mir-927-P1-v2  Hme-Mir-927-P1  Tca-Mir-927-P1 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(Dana_caf1)
scaffold_13250: 3108686-3108747 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GUAGAUCAUAAAAAAAGGGUAUUGUGGAGUUUUAGAAUUCCUACGCUUUACCGUUGCAUAUGAAAUUAGGCAAAGCGUUUGGAUUCUGGAACCCUAUGUAUUCAUUUUUAUAAUGUGUUUUC
Get precursor sequence
Structure
        10           20        30        40        50        60
GUAGAUCAUAAAAAAAG---|    UGU  A            CU       A  GUUGCAU 
                    GGUAU   GG GUUUUAGAAUUC  ACGCUUU CC       A
                    UUAUG   CC CAAGGUCUUAGG  UGCGAAA GG       U
CUUUUGUGUAAUAUUUUUAC^    UAU  -            UU       C  AUUAAAG 
120       110       100         90        80        70
Deep sequencing
Go to detailed chart
3' NTU No
MotifsNo
Tissue expression
 +
Fe
Mature sequence

Dan-Mir-927-P1_5p

mirBase accessionNone
Sequence
0- UUUAGAAUUCCUACGCUUUACC -22
Get sequence
Co-mature sequence

Dan-Mir-927-P1_3p

mirBase accessionNone
Sequence
40- CAAAGCGUUUGGAUUCUGGAAC -62
Get sequence