MirGeneDB 3.0

MirGeneDB ID

Dme-Mir-927-P1

Family name MIR-927 (all species)
Seed UUAGAAU
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-927
Paralogues
Orthologues Aae-Mir-927-P1  Aga-Mir-927-P1  Bge-Mir-927-P1  Dan-Mir-927-P1  Dlo-Mir-927-P1  Dmo-Mir-927-P1  Dsi-Mir-927-P1  Dya-Mir-927-P1  Gpa-Mir-927-P1-v1  Gpa-Mir-927-P1-v2  Hme-Mir-927-P1  Tca-Mir-927-P1 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(Drosophila_melanogaster_BDGP6)
X: 15965962-15966023 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
GGCAAUAUUAAAUUGUGGUUGCUGUAGAGUUUUAGAAUUCCUACGCUUUACCGUGGCAUACGAAAUUCGGCAAAGCGUUUGGAUUCUGAAACCCUACCGAUCCAUUAUCAUGUUAAAAAAAA
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Structure
        10            20        30        40        50        60
GGCAAUAUUAAAUUGUG----|   CU    A            CU       A  GUGGCAU 
                     GUUG  GUAG GUUUUAGAAUUC  ACGCUUU CC       A
                     UAGC  CAUC CAAAGUCUUAGG  UGCGAAA GG       C
AAAAAAAAUUGUACUAUUACC^   --    C            UU       C  CUUAAAG 
120       110       100          90        80        70
Deep sequencing
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3' NTU No
MotifsUGUG in loop
Tissue expression
 +
Bo He He La Ov Sa Wh
Mature sequence

Dme-Mir-927-P1_5p

mirBase accessionMIMAT0005501
Sequence
0- UUUAGAAUUCCUACGCUUUACC -22
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Proposed targets microrna.org: MIMAT0005501
TargetScanFly: dme-miR-927
Star sequence

Dme-Mir-927-P1_3p*

mirBase accessionMIMAT0020882
Sequence
40- CAAAGCGUUUGGAUUCUGAAAC -62
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