MirGeneDB ID | Bge-Mir-927-P1 |
Family name |
MIR-927 (all species) |
Seed |
UUAGAAU |
Species |
Cockroach (Blattella germanica) |
MiRBase ID |
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Paralogues |
Bge-Mir-927-P2-v1
Bge-Mir-927-P2-v2
|
Orthologues |
Aae-Mir-927-P1
Aga-Mir-927-P1
Dan-Mir-927-P1
Dlo-Mir-927-P1
Dme-Mir-927-P1
Dmo-Mir-927-P1
Dsi-Mir-927-P1
Dya-Mir-927-P1
Gpa-Mir-927-P1-v1
Gpa-Mir-927-P1-v2
Hme-Mir-927-P1
Tca-Mir-927-P1
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Neoptera
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Genome context (Bger_2.0) |
KZ614758.1: 199474-199532 [+]
Ensembl
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Precursor (pre-Mir +30nt flank) |
AAGAAGAGAUGCCGAGAGAGUGUGGUUUGCUUUAGAAUUCCUACGCUUUACCGUUUCACUUGAAAGGCAAAGCGUUUGAAUUCUGAAACGAACUGCCCUUAAUUCCUGCCGAACACAGA
Get precursor sequence
|
Structure | 10 20 30 40 50
AAGAAGAGAUGCCGAGA--| U UG C CU A GUUUCA
GAG G GUUUG UUUAGAAUUC ACGCUUU CC \
UUC C CAAGC AAGUCUUAAG UGCGAAA GG C
AGACACAAGCCGUCCUUAA^ C GU A UU C AAAGUU
110 100 90 80 70 60 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
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Ad |
Ad |
Co |
Co |
Di |
Di |
Eg |
Eg |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
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Mature sequence |
Bge-Mir-927-P1_5p |
mirBase accession | None |
Sequence |
0- UUUAGAAUUCCUACGCUUUACC -22
Get sequence
|
Star sequence |
Bge-Mir-927-P1_3p* |
mirBase accession | None |
Sequence |
37- CAAAGCGUUUGAAUUCUGAAAC -59
Get sequence
|