MirGeneDB ID | Hme-Mir-927-P1 |
Family name |
MIR-927 (all species) |
Seed |
UUAGAAU |
Species |
Longwing butterfly (Heliconius melpomene) |
MiRBase ID |
hme-mir-927
|
Paralogues |
Hme-Mir-927-P2
|
Orthologues |
Aae-Mir-927-P1
Aga-Mir-927-P1
Bge-Mir-927-P1
Dan-Mir-927-P1
Dlo-Mir-927-P1
Dme-Mir-927-P1
Dmo-Mir-927-P1
Dsi-Mir-927-P1
Dya-Mir-927-P1
Gpa-Mir-927-P1-v1
Gpa-Mir-927-P1-v2
Tca-Mir-927-P1
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Neoptera
|
Genome context (Hmel_1) |
HE669889: 61418-61478 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GUCCAGUGAAGAUAGCAGCAGCGUUUUCGUUUUAGAAUUCCUACGCUUUACCGUUGCCAAGUUAUUGGGCAAAGCGUUUGGAUUCUAAAACGAAAUAGCUUGCCUUUCUACAGUUCUAUAC
Get precursor sequence
|
Structure | 10 20 30 40 50
GUCCAGUGAAGAUAGCA- -| GU CU A GUUGCCA
GC AGC UUUCGUUUUAGAAUUC ACGCUUU CC \
CG UCG AAAGCAAAAUCUUAGG UGCGAAA GG A
CAUAUCUUGACAUCUUUC U^ AU UU C GUUAUUG
. 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Mature sequence |
Hme-Mir-927-P1_5p |
mirBase accession | MIMAT0024990 |
Sequence |
0- UUUAGAAUUCCUACGCUUUACC -22
Get sequence
|
Co-mature sequence |
Hme-Mir-927-P1_3p |
mirBase accession | None |
Sequence |
39- CAAAGCGUUUGGAUUCUAAAAC -61
Get sequence
|