| MirGeneDB ID | Bge-Mir-927-P2-v1 |
|---|
| Family name |
MIR-927 (all species) |
|---|
| Seed |
UUUAGAA |
|---|
| Species |
Cockroach (Blattella germanica) |
|---|
| MiRBase ID |
|
|---|
| Paralogues |
Bge-Mir-927-P1
Bge-Mir-927-P2-v2
|
|---|
| Orthologues |
Aae-Mir-927-P2
Aga-Mir-927-P2
Dlo-Mir-927-P2
Hme-Mir-927-P2
Tca-Mir-927-P2
|
|---|
| Node of Origin (locus) |
Neoptera
|
|---|
| Node of Origin (family) |
Neoptera
|
|---|
Genome context
(Bger_2.0) |
KZ614944.1: 401461-401525 [+]
Ensembl
|
|---|
Precursor
(pre-Mir +30nt flank) |
GCUUGACAUUGGAAAUUAUUGCUCGCUUCGUUUUAGAAUUUGUACGCUUUGUUGUAAUUUUUUUAAAAAUCACAAAGCAUAUGGAUUCUUGAGCGGAUUGUGCAAUACAAGCUACUACAGAUGGG
Get precursor sequence
|
|---|
| Structure | 10 20 30 40 50 60
GCUUGACAUUGGAAAUU--| U C U UG C UGUAAUUUU
AUUGC CG UUCGUUU AGAAUU UA GCUUUGU \
UAACG GU AGGCGAG UCUUAG AU CGAAACA U
GGGUAGACAUCAUCGAACA^ U U U GU A CUAAAAAUU
120 110 100 90 80 70 |
|---|
| Deep sequencing |
Go to detailed chart
|
|---|
| 3' NTU |
No
|
|---|
| Motifs | CNNC at 3p(+17), UGUG in loop |
|---|
Tissue expression
|
| Ad |
Ad |
Co |
Co |
Di |
Di |
Eg |
Eg |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Em |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ny |
Ov |
| |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|---|
| Mature sequence |
Bge-Mir-927-P2-v1_5p |
| mirBase accession | None |
|---|
| Sequence |
0- UUUUAGAAUUUGUACGCUUUGU -22
Get sequence
|
|---|
| Star sequence |
Bge-Mir-927-P2-v1_3p* |
| mirBase accession | None |
|---|
| Sequence |
43- AAAGCAUAUGGAUUCUUGAGCG -65
Get sequence
|
|---|
