MirGeneDB 2.1

MirGeneDB ID

Bge-Mir-927-P2-v1

Family name MIR-927 (all species)
Seed UUUAGAA
Species Cockroach (Blattella germanica)
MiRBase ID
Paralogues Bge-Mir-927-P1  Bge-Mir-927-P2-v2 
Orthologues Aae-Mir-927-P2  Hme-Mir-927-P2  Tca-Mir-927-P2 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(Bger_2.0)
KZ614944.1: 401461-401525 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
GCUUGACAUUGGAAAUUAUUGCUCGCUUCGUUUUAGAAUUUGUACGCUUUGUUGUAAUUUUUUUAAAAAUCACAAAGCAUAUGGAUUCUUGAGCGGAUUGUGCAAUACAAGCUACUACAGAUGGG
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Structure
        10          20        30        40        50        60  
GCUUGACAUUGGAAAUU--|    U  C       U      UG  C       UGUAAUUUU 
                   AUUGC CG UUCGUUU AGAAUU  UA GCUUUGU         \
                   UAACG GU AGGCGAG UCUUAG  AU CGAAACA         U
GGGUAGACAUCAUCGAACA^    U  U       U      GU  A       CUAAAAAUU 
   120       110       100        90        80        70
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Ad Ad Ny Ny Ny Ny Ny Ny Ny Ny Ov Co Co Em Em Em Em Em Em Em Em Em Em No No
Mature sequence

Bge-Mir-927-P2-v1_5p

mirBase accessionNone
Sequence
0- UUUUAGAAUUUGUACGCUUUGU -22
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Star sequence

Bge-Mir-927-P2-v1_3p*

mirBase accessionNone
Sequence
43- AAAGCAUAUGGAUUCUUGAGCG -65
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