MirGeneDB 3.0

MirGeneDB ID

Tca-Mir-927-P2

Family name MIR-927 (all species)
Seed UUAGAAU
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-927b
Paralogues Tca-Mir-927-P1 
Orthologues Aae-Mir-927-P2  Aga-Mir-927-P2  Bge-Mir-927-P2-v1  Bge-Mir-927-P2-v2  Dlo-Mir-927-P2  Hme-Mir-927-P2 
Node of Origin (locus) Neoptera
Node of Origin (family) Neoptera
Genome context
(Tcas5.2)
LG9: 11684286-11684344 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
CCGCUAAACCGCCCUUUGAGCCCUUCCGGUUUUAGAAUCUGUACGCUUUGUUGUUACUUUAAAAUCACAGAGCUUACGGAUUCUCGAACUGGUGGAGUAUUAAACGCCCAGUUAAUUGU
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Structure
        10          20         30        40        50         
CCGCUAAACCGCCCUUUGA--  -| UU       U          C       UGUUACU 
                     GC CC  CCGGUUU AGAAUCUGUA GCUUUGU       \
                     UG GG  GGUCAAG UCUUAGGCAU CGAGACA       U
UGUUAAUUGACCCGCAAAUUA  A^ U-       C          U       CUAAAAU 
       110       100         90        80        70        60
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17)
Tissue expression
 +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Mature sequence

Tca-Mir-927-P2_5p

mirBase accessionMIMAT0023579
Sequence
0- UUUAGAAUCUGUACGCUUUGUUG -23
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Star sequence

Tca-Mir-927-P2_3p*

mirBase accessionMIMAT0023580
Sequence
36- ACAGAGCUUACGGAUUCUCGAAC -59
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