MirGeneDB ID | Aae-Mir-927-P2 |
Family name |
MIR-927 (all species) |
Seed |
UUAGAAU |
Species |
Yellow fever mosquito (Aedes aegypti) |
MiRBase ID |
aae-mir-10365
|
Paralogues |
Aae-Mir-927-P1
|
Orthologues |
Aga-Mir-927-P2
Bge-Mir-927-P2-v1
Bge-Mir-927-P2-v2
Dlo-Mir-927-P2
Hme-Mir-927-P2
Tca-Mir-927-P2
|
Node of Origin (locus) |
Neoptera
|
Node of Origin (family) |
Neoptera
|
Genome context (Aaeg_L3) |
supercont1.620: 576227-576299 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
ACGAAUGGGGAUACAUUCGCCCGGGUGACCAUUAGAAUGUGGAAUCUGUUUUUGUACAUCAAGUGUUACGAAACGAAGCAAAAAAGUUUUCAUAUUCUUGCGGUCAACCGGGUGGUCUGGCAACACUACAAAG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
ACGAAUGGGGAUACAUU--| G AUU U G UGUACAUCAAGUG
CGCCCGG UGACC AGAAUGUGGAA CU UUUU \
GUGGGCC ACUGG UCUUAUACUUU GA AAAA U
GAAACAUCACAACGGUCUG^ A CGU U A CGAAGCAAAGCAU
130 120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17), UGUG in loop |
Tissue expression
|
|
Mature sequence |
Aae-Mir-927-P2_5p |
mirBase accession | MIMAT0045993 |
Sequence |
0- AUUAGAAUGUGGAAUCUGUUUU -22
Get sequence
|
Star sequence |
Aae-Mir-927-P2_3p* |
mirBase accession | None |
Sequence |
51- AAAAGUUUUCAUAUUCUUGCGG -73
Get sequence
|