MirGeneDB ID | Aae-Mir-989 |
Family name |
MIR-989 (all species) |
Seed |
GUGAUGU |
Species |
Yellow fever mosquito (Aedes aegypti) |
MiRBase ID |
aae-mir-989
|
Paralogues |
|
Orthologues |
Aga-Mir-989
Dan-Mir-989
Dlo-Mir-989
Dme-Mir-989
Dmo-Mir-989
Dsi-Mir-989
Dya-Mir-989
Gpa-Mir-989
Hme-Mir-989-P1
Hme-Mir-989-P2
Tca-Mir-989
|
Node of Origin (locus) |
Endopterygota
|
Node of Origin (family) |
Endopterygota
|
Genome context (Aaeg_L3) |
supercont1.115: 804186-804251 [-]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
GCACAGCUUCAUCAUACGGUCAUGGGGGACCGCCGCUACCUCGCUUUCACUUGGUACCGAUUUCCCAUAAUCCAUGUGAUGUGACGUAGUGGUACCUUCCCUUGGCUAUUACAACACUUCCUCCUC
Get precursor sequence
|
Structure | 10 20 30 40 50 60
GCACAGCUUCAUCAUAC--| U CC- C UU U GUACCGAUU
GGUCA GGGGGA GCCGCUAC UCGC UCAC UG \
UCGGU UCCCUU UGGUGAUG AGUG AGUG AC U
CUCCUCCUUCACAACAUUA^ - CCA C U- U CUAAUACCC
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Aae-Mir-989_5p* |
mirBase accession | None |
Sequence |
0- CGCCGCUACCUCGCUUUCACUUG -23
Get sequence
|
Mature sequence |
Aae-Mir-989_3p |
mirBase accession | MIMAT0014239 |
Sequence |
44- UGUGAUGUGACGUAGUGGUACC -66
Get sequence
|