MirGeneDB ID | Dlo-Mir-989 |
Family name |
MIR-989 (all species) |
Seed |
GUGAUGU |
Species |
Braconid wasp (Diachasmimorpha longicaudata) |
MiRBase ID |
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Paralogues |
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Orthologues |
Aae-Mir-989
Aga-Mir-989
Dan-Mir-989
Dme-Mir-989
Dmo-Mir-989
Dsi-Mir-989
Dya-Mir-989
Gpa-Mir-989
Hme-Mir-989-P1
Hme-Mir-989-P2
Tca-Mir-989
|
Node of Origin (locus) |
Endopterygota
|
Node of Origin (family) |
Endopterygota
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Genome context (GCF_034640455.1_iyDiaLong2_genomic) |
NC_087240.1: 2462094-2462209 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
UUGGGACAUUAUUUUUUACGGUGUAAGGUCUAUCACUACGUCACAUAAUCACCAUUCUGCACUUCCCCGUGGAGAUGACAAGAUAUCUGUGAAUUUAUCGAGUUGUUUUUAUGGUGGGGGUUGGUGUGAUGUGCCUUAGUGGUAGGCCUUGCGCUGUGCACAUCAUCGAUCAUCGU
Get precursor sequence
|
Structure | 10 20 30 40 50 60 70 80
UUGGGACAUUAUUUUUU--| CGU AAU AUUCUGCACUUCCCCGUGGAGAUGACAAGAUAUC
ACGGUGUAAGGUCUAUCACUA CACAU CACC \
UGUCGCGUUCCGGAUGGUGAU GUGUA GUGG U
UGCUACUAGCUACUACACG^ UCC GU- UUGGGGGUGGUAUUUUUGUUGAGCUAUUUAAGUG
170 160 150 140 130 120 110 100 90 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | CNNC at 3p(+17) |
Tissue expression
|
|
Star sequence |
Dlo-Mir-989_5p* |
mirBase accession | None |
Sequence |
0- UAUCACUACGUCACAUAAUCACC -23
Get sequence
|
Mature sequence |
Dlo-Mir-989_3p |
mirBase accession | None |
Sequence |
94- UGUGAUGUGCCUUAGUGGUAGG -116
Get sequence
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