MirGeneDB 3.0

MirGeneDB ID

Dlo-Mir-989

Family name MIR-989 (all species)
Seed GUGAUGU
Species Braconid wasp (Diachasmimorpha longicaudata)
MiRBase ID
Paralogues
Orthologues Aae-Mir-989  Aga-Mir-989  Dan-Mir-989  Dme-Mir-989  Dmo-Mir-989  Dsi-Mir-989  Dya-Mir-989  Gpa-Mir-989  Hme-Mir-989-P1  Hme-Mir-989-P2  Tca-Mir-989 
Node of Origin (locus) Endopterygota
Node of Origin (family) Endopterygota
Genome context
(GCF_034640455.1_iyDiaLong2_genomic)
NC_087240.1: 2462094-2462209 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUGGGACAUUAUUUUUUACGGUGUAAGGUCUAUCACUACGUCACAUAAUCACCAUUCUGCACUUCCCCGUGGAGAUGACAAGAUAUCUGUGAAUUUAUCGAGUUGUUUUUAUGGUGGGGGUUGGUGUGAUGUGCCUUAGUGGUAGGCCUUGCGCUGUGCACAUCAUCGAUCAUCGU
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Structure
        10          20        30        40        50        60        70        80        
UUGGGACAUUAUUUUUU--|                    CGU     AAU    AUUCUGCACUUCCCCGUGGAGAUGACAAGAUAUC 
                   ACGGUGUAAGGUCUAUCACUA   CACAU   CACC                                  \
                   UGUCGCGUUCCGGAUGGUGAU   GUGUA   GUGG                                  U
UGCUACUAGCUACUACACG^                    UCC     GU-    UUGGGGGUGGUAUUUUUGUUGAGCUAUUUAAGUG 
    170       160       150       140       130        120       110       100        90
Deep sequencing
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3' NTU No
MotifsCNNC at 3p(+17)
Tissue expression
 +
Sr Sr
Star sequence

Dlo-Mir-989_5p*

mirBase accessionNone
Sequence
0- UAUCACUACGUCACAUAAUCACC -23
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Mature sequence

Dlo-Mir-989_3p

mirBase accessionNone
Sequence
94- UGUGAUGUGCCUUAGUGGUAGG -116
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