MirGeneDB 3.0
MirGeneDB ID

Gpa-Mir-989

Family name MIR-989 (all species)
Seed GUGAUGU
Species Tsetse fly (Glossina pallidipes)
MiRBase ID
Paralogues
Orthologues Aae-Mir-989  Aga-Mir-989  Dan-Mir-989  Dme-Mir-989  Dmo-Mir-989  Dsi-Mir-989  Dya-Mir-989  Hme-Mir-989-P1  Hme-Mir-989-P2  Tca-Mir-989 
Node of Origin (locus) Aparaglossata
Node of Origin (family) Aparaglossata
Genome context
(GpalI1)		 Scaffold477: 52155-52383 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UCGUCGUAAUGGCAAACGACGUUGUGGAUCAGCCACUACAUCACAGUCACGUGAUUUCAAUACGAAAACAUUUCACUUUUUCCCAUAUAACAGACAUUAUCCUUGGAUAGUCAACAGCCAGCAAACGCUCGUUGUUACUGUCGUUGUUGCCGCAAUUGCUGCGACUGCAGUUACAGUUACUGCACGAGUACAGUGUGGUUGGCAAAAAGUUCAUGUUUUCAUCCUUAUAAUAUUUCAUGUGAUGUGACGUAGUGGAACAUUCCUGACGUUUUGCAAACUACAUGUACUU
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Structure
        10          20        30         40        50        60        70        80        90       100       110       120       130       140    
UCGUCGUAAUGGCAAAC--|      U   UCAG-       A     G       AUUUCAAUACGAAAACAUUUCACUUUUUCCCAUAUAACAGACAUUAUCCUUGGAUAGUCAACAGCCAGCAAACGCUCGUUGUUACUGUCG 
                   GACGUUG GGA     CCACUAC UCACA UCACGUG                                                                                          U
                   UUGCAGU CCU     GGUGAUG AGUGU AGUGUAC                                                                                          U
UUCAUGUACAUCAAACGUU^      -   UACAA       C     -       UUUAUAAUAUUCCUACUUUUGUACUUGAAAAACGGUUGGUGUGACAUGAGCACGUCAUUGACAUUGACGUCAGCGUCGUUAACGCCGUUG 
       280       270        260       250        240       230       220       210       200       190       180       170       160       150
Deep sequencing
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3' NTU No
MotifsNo
Tissue expression
-   +
Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl Gl
Star sequence

Gpa-Mir-989_5p*
mirBase accessionNone
Sequence 
0- AGCCACUACAUCACAGUCACGUG -23
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Mature sequence

Gpa-Mir-989_3p
mirBase accessionNone
Sequence 
207- UGUGAUGUGACGUAGUGGAACA -229
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