| MirGeneDB ID | Gpa-Mir-989 |
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| Family name |
MIR-989 (all species) |
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| Seed |
GUGAUGU |
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| Species |
Tsetse fly (Glossina pallidipes) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aae-Mir-989
Aga-Mir-989
Dan-Mir-989
Dlo-Mir-989
Dme-Mir-989
Dmo-Mir-989
Dsi-Mir-989
Dya-Mir-989
Hme-Mir-989-P1
Hme-Mir-989-P2
Tca-Mir-989
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| Node of Origin (locus) |
Endopterygota
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| Node of Origin (family) |
Endopterygota
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Genome context
(GpalI1) |
Scaffold477: 52155-52383 [+]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
UCGUCGUAAUGGCAAACGACGUUGUGGAUCAGCCACUACAUCACAGUCACGUGAUUUCAAUACGAAAACAUUUCACUUUUUCCCAUAUAACAGACAUUAUCCUUGGAUAGUCAACAGCCAGCAAACGCUCGUUGUUACUGUCGUUGUUGCCGCAAUUGCUGCGACUGCAGUUACAGUUACUGCACGAGUACAGUGUGGUUGGCAAAAAGUUCAUGUUUUCAUCCUUAUAAUAUUUCAUGUGAUGUGACGUAGUGGAACAUUCCUGACGUUUUGCAAACUACAUGUACUU
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60 70 80 90 100 110 120 130 140
UCGUCGUAAUGGCAAAC--| U UCAG- A G AUUUCAAUACGAAAACAUUUCACUUUUUCCCAUAUAACAGACAUUAUCCUUGGAUAGUCAACAGCCAGCAAACGCUCGUUGUUACUGUCG
GACGUUG GGA CCACUAC UCACA UCACGUG U
UUGCAGU CCU GGUGAUG AGUGU AGUGUAC U
UUCAUGUACAUCAAACGUU^ - UACAA C - UUUAUAAUAUUCCUACUUUUGUACUUGAAAAACGGUUGGUGUGACAUGAGCACGUCAUUGACAUUGACGUCAGCGUCGUUAACGCCGUUG
280 270 260 250 240 230 220 210 200 190 180 170 160 150 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | No |
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Tissue expression
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| Star sequence |
Gpa-Mir-989_5p* |
| mirBase accession | None |
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| Sequence |
0- AGCCACUACAUCACAGUCACGUG -23
Get sequence
|
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| Mature sequence |
Gpa-Mir-989_3p |
| mirBase accession | None |
|---|
| Sequence |
207- UGUGAUGUGACGUAGUGGAACA -229
Get sequence
|
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