MirGeneDB 3.0
MirGeneDB ID

Tca-Mir-989

Family name MIR-989 (all species)
Seed GUGAUGU
Species Red flour beetle (Tribolium castaneum)
MiRBase ID tca-mir-989
Paralogues
Orthologues Aae-Mir-989  Aga-Mir-989  Dan-Mir-989  Dlo-Mir-989  Dme-Mir-989  Dmo-Mir-989  Dsi-Mir-989  Dya-Mir-989  Gpa-Mir-989  Hme-Mir-989-P1  Hme-Mir-989-P2 
Node of Origin (locus) Endopterygota
Node of Origin (family) Endopterygota
Genome context
(Tcas5.2)		 LG4: 352055-352112 [-] Ensembl
Precursor
(pre-Mir +30nt flank)
GUGGUGCUCGUAUUUUUGCUCCCAAGGUCCCGCCACUAGGUCGCAUAACACGCAUUGUCAACACCGUGUGAUGUGACGUAGUGGUAUGUCUAGGGGAGUUGCCUUUGCAUCCUAGUGC
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Structure
        10          20        30        40        50        
GUGGUGCUCGUAUUUUU--|     AA  UCCC       G       A     CAUUG 
                   GCUCCC  GG    GCCACUA GUCGCAU ACACG     U
                   UGAGGG  UC    UGGUGAU CAGUGUA UGUGC     C
CGUGAUCCUACGUUUCCGU^     GA  UGUA       G       G     CACAA 
      110       100        90        80        70        60
Deep sequencing
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CommentThere are Drosha cuts -1 and -3.
3' NTU No
MotifsUG at 5p(-14)
Tissue expression
-   +
Ad Ea Em Em Em Em Em Fe Fe Fe Fe Oo
Star sequence

Tca-Mir-989_5p*
mirBase accessionMIMAT0018822
Sequence 
0- CGCCACUAGGUCGCAUAACACG -22
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Mature sequence

Tca-Mir-989_3p
mirBase accessionMIMAT0018823
Sequence 
36- UGUGAUGUGACGUAGUGGUAUG -58
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