MirGeneDB ID | Aae-Mir-957 |
Family name |
MIR-957 (all species) |
Seed |
GAAACCG |
Species |
Yellow fever mosquito (Aedes aegypti) |
MiRBase ID |
aae-mir-957
|
Paralogues |
|
Orthologues |
Aga-Mir-957
Dan-Mir-957
Dme-Mir-957
Dmo-Mir-957
Dsi-Mir-957
Dya-Mir-957-P1
Dya-Mir-957-P2
Gpa-Mir-957
|
Node of Origin (locus) |
Diptera
|
Node of Origin (family) |
Diptera
|
Genome context (Aaeg_L3) |
supercont1.7: 464294-464360 [+]
Ensembl
|
Precursor (pre-Mir +30nt flank) |
CGGAACGCGCUCCGAAGGCACUGCUCCGGCGUUAGUUUUGGGCGGGUUUUAGUGUAUUUCGAUUAGAGUAUCAAUUGAAACCGUCCAAAACUGAGGCCGGCGCGUGUUUGCCAAAAUCAUCAAAGUG
Get precursor sequence
|
Structure | 10 20 30 40 50 60
CGGAACGCGCUCCGAAG---| U U G G GUAUUUCGA
GCAC GC CCGGC UUAGUUUUGGGCGG UUUUAGU U
UGUG CG GGCCG AGUCAAAACCUGCC AAAGUUA U
GUGAAACUACUAAAACCGUU^ - C G - ACUAUGAGA
120 110 100 90 80 70 |
Deep sequencing |
Go to detailed chart
|
3' NTU |
No
|
Motifs | No |
Tissue expression
|
|
Star sequence |
Aae-Mir-957_5p* |
mirBase accession | None |
Sequence |
0- GUUAGUUUUGGGCGGGUUUUAGU -23
Get sequence
|
Mature sequence |
Aae-Mir-957_3p |
mirBase accession | MIMAT0014248 |
Sequence |
45- UGAAACCGUCCAAAACUGAGGC -67
Get sequence
|