MirGeneDB 2.1

MirGeneDB ID

Dsi-Mir-957

Family name MIR-957 (all species)
Seed GAAACCG
Species Fruit fly (Drosophila simulans)
MiRBase ID dsi-mir-957
Paralogues
Orthologues Aae-Mir-957  Dan-Mir-957  Dme-Mir-957  Dmo-Mir-957  Dya-Mir-957-P1  Dya-Mir-957-P2 
Node of Origin (locus) Diptera
Node of Origin (family) Diptera
Genome context
(Drosophila_simulans.ASM75419v3.dna.toplevel)
3L: 21929498-21929565 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUGUAUCCGUAGUGUUGUCCACAAUAGACCUUAGUUUUCGACGUGUUUUGGUGUGCUGGGGAGUUCUAUUCCGAUUGAAACCGUCCAAAACUGAGGCCAACUGUGAGGCGUGAGCAUCUAUCCAAAA
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Structure
        10         20         30        40        50        60    
AUUGUAUCCGUAGUGUU-   -|   AUAGA          C    U    UG  GUGCUGGGGA 
                  GUC CACA     CCUUAGUUUU GACG GUUU  GU          \
                  CGG GUGU     GGAGUCAAAA CUGC CAAA  UA          G
AAAACCUAUCUACGAGUG   A^   CAACC          C    -    GU  GCCUUAUCUU 
      120       110       100        90         80        70
Deep sequencing
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CommentThere is a single snp between the mirbase entry and this entry.
3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
 +
He Wh
Star sequence

Dsi-Mir-957_5p*

mirBase accessionNone
Sequence
0- CUUAGUUUUCGACGUGUUUUGGU -23
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Mature sequence

Dsi-Mir-957_3p

mirBase accessionMIMAT0012498
Sequence
46- UGAAACCGUCCAAAACUGAGGC -68
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