| MirGeneDB ID | Gpa-Mir-957 |
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| Family name |
MIR-957 (all species) |
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| Seed |
GAAACCG |
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| Species |
Tsetse fly (Glossina pallidipes) |
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| MiRBase ID |
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| Paralogues |
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| Orthologues |
Aae-Mir-957
Aga-Mir-957
Dan-Mir-957
Dme-Mir-957
Dmo-Mir-957
Dsi-Mir-957
Dya-Mir-957-P1
Dya-Mir-957-P2
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| Node of Origin (locus) |
Diptera
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| Node of Origin (family) |
Diptera
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Genome context
(GpalI1) |
Scaffold7: 2697993-2698057 [-]
Ensembl
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Precursor
(pre-Mir +30nt flank) |
GCCGAAGUAACAAUACGACACAUAAAGGGCCUUAGCUUUGGGCGGGUUUUGGUGUGUAUGGGUUUGAAACCAUUGAAACCGUCCAAAACUGAGGCCAGAUAUGUGGCAUGGAACACAUCCUUCAA
Get precursor sequence
|
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| Structure | 10 20 30 40 50 60
GCCGAAGUAACAAUACGA--| AAG C G UG GUGUAUGG
CACAUA GGCCUUAG UUUGGGCGG UUU GU G
GUGUAU CCGGAGUC AAACCUGCC AAA UA U
AACUUCCUACACAAGGUACG^ AGA A - GU CCAAAGUU
120 110 100 90 80 70 |
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| Deep sequencing |
Go to detailed chart
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| 3' NTU |
No
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| Motifs | UGUG in loop |
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Tissue expression
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| Star sequence |
Gpa-Mir-957_5p* |
| mirBase accession | None |
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| Sequence |
0- CUUAGCUUUGGGCGGGUUUUGGU -23
Get sequence
|
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| Mature sequence |
Gpa-Mir-957_3p |
| mirBase accession | None |
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| Sequence |
43- UGAAACCGUCCAAAACUGAGGC -65
Get sequence
|
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