MirGeneDB 3.0

MirGeneDB ID

Dmo-Mir-957

Family name MIR-957 (all species)
Seed GAAACCG
Species Fruit fly (Drosophila mojavensis)
MiRBase ID
Paralogues
Orthologues Aae-Mir-957  Aga-Mir-957  Dan-Mir-957  Dme-Mir-957  Dsi-Mir-957  Dya-Mir-957-P1  Dya-Mir-957-P2  Gpa-Mir-957 
Node of Origin (locus) Diptera
Node of Origin (family) Diptera
Genome context
(Dmoj_caf1)
scaffold_6680: 22273703-22273770 [+] Ensembl
Precursor
(pre-Mir +30nt flank)
UUUUCUUCCCACAAAAUGCCCACAAUGGAUCUUAGUUUUAGACGUGUUUUGGUGUGCUUGGGAGUUUUGUUCCGAUUGAAACCGUCCAAAACUGAGGCCAAUUGUGAGGCGAAAGCAUCCAGAAGGAA
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Structure
        10         20          30        40        50        60    
UUUUCUUCCCACAAAAU-   -     -|  A          A    U    UG  GUGCUUGGGA 
                  GCC CACAA UGG UCUUAGUUUU GACG GUUU  GU          \
                  CGG GUGUU ACC GGAGUCAAAA CUGC CAAA  UA          G
AAGGAAGACCUACGAAAG   A     A^  -          C    -    GU  GCCUUGUUUU 
      120       110       100         90         80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Em Fe Ma Ma
Star sequence

Dmo-Mir-957_5p*

mirBase accessionNone
Sequence
0- CUUAGUUUUAGACGUGUUUUGGU -23
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Mature sequence

Dmo-Mir-957_3p

mirBase accessionNone
Sequence
46- UGAAACCGUCCAAAACUGAGGC -68
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