MirGeneDB 3.0

MirGeneDB ID

Dme-Mir-957

Family name MIR-957 (all species)
Seed GAAACCG
Species Fruit fly (Drosophila melanogaster)
MiRBase ID dme-mir-957
Paralogues
Orthologues Aae-Mir-957  Aga-Mir-957  Dan-Mir-957  Dmo-Mir-957  Dsi-Mir-957  Dya-Mir-957-P1  Dya-Mir-957-P2  Gpa-Mir-957 
Node of Origin (locus) Diptera
Node of Origin (family) Diptera
Genome context
(Drosophila_melanogaster_BDGP6)
3L: 22518210-22518277 [-] UCSC Ensembl
Precursor
(pre-Mir +30nt flank)
AUUAUAUCCGUAGUGUUGUCCACAAUAGACCUUAGUUUUCGACGUGUUUUGGUGUGCUGGGGAGUUCUAUUCCGAUUGAAACCGUCCAAAACUGAGGCCAACUGUGAGGCGCGAGCAUCUAUCCAAAA
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Structure
        10         20         30        40        50        60    
AUUAUAUCCGUAGUGUU-   -|   AUAGA          C    U    UG  GUGCUGGGGA 
                  GUC CACA     CCUUAGUUUU GACG GUUU  GU          \
                  CGG GUGU     GGAGUCAAAA CUGC CAAA  UA          G
AAAACCUAUCUACGAGCG   A^   CAACC          C    -    GU  GCCUUAUCUU 
      120       110       100        90         80        70
Deep sequencing
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3' NTU No
MotifsUG at 5p(-14), CNNC at 3p(+17), UGUG in loop
Tissue expression
 +
Bo He He La Ov Sa Wh
Star sequence

Dme-Mir-957_5p*

mirBase accessionMIMAT0020851
Sequence
0- CUUAGUUUUCGACGUGUUUUGGU -23
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Mature sequence

Dme-Mir-957_3p

mirBase accessionMIMAT0005470
Sequence
46- UGAAACCGUCCAAAACUGAGGC -68
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Proposed targets microrna.org: MIMAT0005470
TargetScanFly: dme-miR-957